| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1094 |
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| Symbol | |
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| ID | 8367516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1294845 |
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| End bp | 1295924 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644983522 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003141210 |
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| Protein GI | 256819931 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATC CTATCTATCT GTCTATCCTC CTACTCCTTA CTACTGTAGT TGTTGCGTTG
CCCTTTATCA AAGTGCCCAT ATCCGTATCG GCACGTGGGG TCATACGCTC TAATTTCGAA
GATACAGAAC TTACTGCTCC TGTGAGTGGT AGGGTAGTAA AGTGCTTTCT CTCTCAAAAC
AACCAAAACG TTCAAAAAGG TGACACCTTG CTCATTATCA CTACAGAACT ATTAAACACA
CAGCAACAAC TTGTCAATAC TCAACAACAA GATTATAACG CACAATTACA AGACCTTACT
GCATTAGTCT CTCACAAAAA TACACCCCTG CAAACACCAC AATACGCTCA AGAAAGAGCT
GCTTTTTTGG AAAGAATAGG CCAGTTGCAA GCACAATTAT CCTTAGCTAA AAAGGAACTC
GATCGTGCCA ATCAACTTTT TAGTAAAGAT GTAATCGCTA AAGCTGAGTA TGAAAAAATA
TACTATCGTC ACGAAGAACT CTTGCGCCAA GTGCAAAGCA CCCAGCAACA ACAATATGCC
CAATGGCAAG CACAGCGTAC AGAAGTAGAA CGCAAATTGC AGTCATTGCA ATCAGACGAG
AAGCGCCTCA GCCAAGAACA ACAAAACTAT GTGGTAATAG CACCCATCAC AGGAACTATT
GCACAGTACA AAGGCATTCG TCAAGGCAAC TTTCTCTCTC AAGGGCAAAC TATCGCTACT
ATCTCTCCCG AACAAAACCT CATAGCCGAG TGTTTAGTCT CTCCAAAAGA CATTGGTTTT
ATACACCCCT CGCAAAACGT ACGTTTTCAA ATAGATACTT ACAATTATAA CCAATGGGGA
TTGCTCAACG GCAGTGTAAA AGAAATAGAT AAAAACTTAG TAGTAAATGA GCAAACAGGC
GAAGGCTTAT TTAAAATACG CTGTGGAATC AGCAAAGGTT ATTTACAACT GAAAAATGGC
TATCGTGGTA ATATAAATAA AGGAATGAGT TTTACAGCTC GCTTTTATCT TACCAATCGC
ACCCTTTGGC AACTCCTCTT CGACCGCACC GACGACTGGT TCAATCCTAA TATAATTTAA
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| Protein sequence | MKHPIYLSIL LLLTTVVVAL PFIKVPISVS ARGVIRSNFE DTELTAPVSG RVVKCFLSQN
NQNVQKGDTL LIITTELLNT QQQLVNTQQQ DYNAQLQDLT ALVSHKNTPL QTPQYAQERA
AFLERIGQLQ AQLSLAKKEL DRANQLFSKD VIAKAEYEKI YYRHEELLRQ VQSTQQQQYA
QWQAQRTEVE RKLQSLQSDE KRLSQEQQNY VVIAPITGTI AQYKGIRQGN FLSQGQTIAT
ISPEQNLIAE CLVSPKDIGF IHPSQNVRFQ IDTYNYNQWG LLNGSVKEID KNLVVNEQTG
EGLFKIRCGI SKGYLQLKNG YRGNINKGMS FTARFYLTNR TLWQLLFDRT DDWFNPNII
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