Gene Coch_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1083 
Symbol 
ID8367505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1284578 
End bp1285297 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content40% 
IMG OID644983511 
Producthypothetical protein 
Protein accessionYP_003141199 
Protein GI256819920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00230373 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAACA AGATTAATCT TGAAGATATT CTCTTCTTAG ACATAGAAAC GGTACCACTC 
TATGAACAAC ACGCTGAGCT TTCGGTTTTA GAACAAGAAC TGTGGGAGGA AAAGACACGA 
TATCAGCGGA AAGATGAGTT TACTGCTGAA GAATTTTACG ACCGTGCAGG TATTTGGGCG 
GAGTTTGGTA AGATTGTATG TATATCAGTA GGCTACTTTT CTTTTCGGTA TCAGCAACGC 
ACTTTTAGGG TTACCTCGTT TGTGGGAGAG GAAGAAGTGT TGTTAAAAGA TTTTGTACGT 
TTGGTAGAAG AACACTTTTC ACGCGCTAAT AAATTGTTTT GTGCTCATAA CGGCAAAGAG 
TTTGACTTTC CTTACCTTTC GCGACGTATG ATTATCAATG GTATTCCTAT TCCTCAAAAA 
CTACAGCTCT TTGGTAAGAA ACCTTGGGAA ATTCCGCATC TCGATACTCT TGAACTATGG 
AAATTTGGCG ATTATAAACA CTTCACTTCG CTGAAGCTCT TGGCTCATAT TTTGGGCATT 
CCTTCGCCTA AGGACGATAT TAATGGTAGC GAAGTGCGTG ATGTGTTCTA CAATGAAGGC 
GATGTAGATC GCATCGCTAC TTATTGTGAA AAAGATACTA TTACAGTAGC CCAAATACTG 
CTACGTTTCC GGAACGAAGA GCTTCTAACC GATGATGAAA TCCTAATTGT AGGGCATTAA
 
Protein sequence
MLNKINLEDI LFLDIETVPL YEQHAELSVL EQELWEEKTR YQRKDEFTAE EFYDRAGIWA 
EFGKIVCISV GYFSFRYQQR TFRVTSFVGE EEVLLKDFVR LVEEHFSRAN KLFCAHNGKE 
FDFPYLSRRM IINGIPIPQK LQLFGKKPWE IPHLDTLELW KFGDYKHFTS LKLLAHILGI 
PSPKDDINGS EVRDVFYNEG DVDRIATYCE KDTITVAQIL LRFRNEELLT DDEILIVGH