Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1079 |
Symbol | |
ID | 8367501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1281614 |
End bp | 1282369 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644983507 |
Product | Patatin |
Protein accession | YP_003141195 |
Protein GI | 256819916 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0128373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTAG GTTTAGTATT TTCAGGAGGC GGGGTGCGCG CTTTGGCACA CGCTGGATTG TTAAAGGCTT TGGAAGAAAA AGGCTTGCAA CCCTCAATTA TTTCGGGTAC CAGTGGTGGA GCACTCATTG GGGCACTCTA CGCTTGTGGG GTAAAGCCCG AGGATATGGT GCATTTTTTT AAGGAAACAC CTGTGTTCAA ATGGTCGATG CTCACTTTTA AAAAAGTGGG ATTAGTAGAT AGTGCTAAAT ATACCAAGTT CTTTAAAAAA CAATTCCAAT GTCCGACTTT TGAAGACTTG CGATTGCCCT TAGTGGTAAC AGCTACCAAT CTGCTGAATG GTAAAGTACA GTATTTTAGC AAAGGAGAGC TCATTCAGCC CCTCATTGCA TCGTCGGCAT TACCGCCTTA CTTCTCACCG GTGAGAATAG GAGACAGTTT ATATTGCGAC GGGGGACTGC TGAACAACTT CCCCATAGAA CCCCTCAAAG ACCGATGTGA TAGAATTATA GGGAGCTTTG TGAATCCGCT AGAAACGATT ACCGAGAAGG AACTCAGCAA CTCGTTCCAG TTTATGCAAC GGATTTACAA CATCACTATG GATGGCAATT ATAACCGCAA GTTCAAAAAA TGTGACCACT TGCTACTACA TAATCTCAGC AATGTAGGCG TACTCGATAC TAAAATGCTC GATCACGCCT TCGAATATGG ATACGAACAA ACAATTACCA AATTAGCTAA TTTGTCAGTT AGCTAA
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Protein sequence | MKLGLVFSGG GVRALAHAGL LKALEEKGLQ PSIISGTSGG ALIGALYACG VKPEDMVHFF KETPVFKWSM LTFKKVGLVD SAKYTKFFKK QFQCPTFEDL RLPLVVTATN LLNGKVQYFS KGELIQPLIA SSALPPYFSP VRIGDSLYCD GGLLNNFPIE PLKDRCDRII GSFVNPLETI TEKELSNSFQ FMQRIYNITM DGNYNRKFKK CDHLLLHNLS NVGVLDTKML DHAFEYGYEQ TITKLANLSV S
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