Gene Coch_1078 details

Gene Information

• Locus tag: Coch_1078
• ID: 8367500
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 1279427
• End bp: 1281424
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 644983506
• Product: ferrous iron transport protein B
• Protein accession: YP_003141194
• Protein GI: 256819915
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0370] Fe2+ transport system protein B
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00437] ferrous iron transporter FeoB

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.996842
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCAAATT TAAAAATCGC CCTTGTGGGC AACCCTAATA CCGGTAAAAG TTCGCTCTTC 
AATGCATTGA CGGGCTTGAA CCAAAAGGTA GGCAACTACC CTGGTATTAC CGTGGAAAAA 
AAAATAGGAT ACTGTAAGCT TTCCGATACC CAGCAAGCCG AAATCATAGA CTTGCCGGGC 
GCTTATAGTC TCAACCCAAG CTCGGAAGAC GAGCACGTGG CTGTAAATGT GCTTACACAT 
AGCTCTGAGC CTCATTATCC TGATGTGGTG GTAGTGGTGT GTGAGGTGAG TAACCTTAAG 
CAAAATCTCT TGCTCTTTAC CCAAGTAAAA GACCTTGGGT TGCCTACGAT ACTTGTTATC 
AATATGGTAG ACCAGATGCA CAAAAAGGGT ATCAGTATTG AGGTGGAAAA ATTAGCTGAG 
GTCTTGCAAA CGAAAGTTGT GCTCACTAGT ACTCGCAAAG GCGAAGGACT TACAGAACTG 
AAAGAAGCGA TTGTAAATTA TCAACAACTG TCGCTTACTC CTTGCGTAGA TATCTCTCGC 
TTAAAGGCGA TGACTTTTGG CACGTCGGAA AGTGAGCAAC GGCGCAAACA GCAAAAAGAA 
ACGATACTTC GCTATCAGTT TATCAACAAA ATACTGAAAG AGACATATAC GGTAGACCAG 
CGCAAAGCAC AGACGCTTCG AGCACGTCTC GACCGCTTCC TCATACACCC CTTCTTTGGC 
TATGTGGTGT TTGCTGCGAT ACTCTTGCTT ATCTTCCAAG CAGTATTTAC TTGGTCGAGC 
TATCCAATGG ATTGGATAGA AAACGGTTTC AATGTTTTTG GGGAATGGCT TGCTACTAAA 
CTACCTGCTG GGGCACTTAG CGAATTACTA ATAGAGGGTA TCCTACCAGG AATCGCAGGT 
ATCACAGTGT TTATCCCCCA AATAGCTGTA CTCTTCACCT TGATTGCCCT ATTGGAAGAA 
AGTGGCTATA TGAGTAGGGT GGTGTTCTTG ATGGACAATG TAATGCGTCG TTTTGGGCTT 
AGTGGTAAGA GTGTTGTTCC TCTGATTTCG GGAGCAGCTT GTGCTGTACC TGCCGTGATG 
ATTGCCCGCA ATATTGAGAA TTGGAAAGAA CGCCTAATCA CCATACTTGT TACTCCGTTT 
ATGACCTGTT CGGCACGTTT GCCCGTATAT CTCATCATCA TTAACTTGGT AATCCCAGAC 
GGTGATTTTT GCTGGATTAG CTATAAAGCG TGGACGTTCT TTGCGATGTA CTTTTTGGGC 
TTTGCGGTAG CTTTGCTATC GGCTTTCATC TTAGACAAAG TACTGAAGAT GCACAAGAAC 
AGCAGTTTCT TTATCGCAGA AATTCCCGAT TATAAAATTC CGCTTTTGCG CAATGTATGC 
CTCACTGTAT ACGAGAAGAC CAAAGGCTTT GTAGTAGGAG CGGGGAAGTT CATTTTAGCA 
ATTTCGATAC TTTTGTGGTT CTTAGGGTCT CACGGAGTAG GAGAAAAGTA CAACAGCATA 
GAGGCTACTG CCGAGCAGTT GGCACAAACT CACCAGTGGA CAGCCGAGCA GAAAGCACAT 
TACATAGAAG CCCAAAGTCT TGAGTACTCG TTTTTGGGTT ACATAGGCAA AGGGATAGAG 
CCCGTATTTC GTCCGCTGGG CTACGATTGG AAAATCAGTA TAGGGGTAGT AGCCTCGTTT 
GCAGCGCGAG AGGTGTTCAT TAGTACCCTA TCAACGGTTT ATAGTTTAGG AAAAGATTTG 
GATACCGAAG GCGAAGAGGG AGAACGTACT ATCTTGACAA AAATGCGCGC TGAAGTACGC 
CCTGATGGTA CGCCTGTATA CACACTCGGC ACCGGTATTT CGCTCTTGCT CTATTACGCT 
TTTGCAATGC AGTGCCTCAG CACTGTTGCC GTAGTGCGCA AAGAAACCAA TAGCTGGAAA 
TGGACAGCTA TCCAATGGAT ATTTATGACG GGAGTTGCCT ACGTGAGTGC AATGCTGGCA 
TTTATTTTAA TTAGATAA 

 

Protein sequence

MANLKIALVG NPNTGKSSLF NALTGLNQKV GNYPGITVEK KIGYCKLSDT QQAEIIDLPG 
AYSLNPSSED EHVAVNVLTH SSEPHYPDVV VVVCEVSNLK QNLLLFTQVK DLGLPTILVI 
NMVDQMHKKG ISIEVEKLAE VLQTKVVLTS TRKGEGLTEL KEAIVNYQQL SLTPCVDISR 
LKAMTFGTSE SEQRRKQQKE TILRYQFINK ILKETYTVDQ RKAQTLRARL DRFLIHPFFG 
YVVFAAILLL IFQAVFTWSS YPMDWIENGF NVFGEWLATK LPAGALSELL IEGILPGIAG 
ITVFIPQIAV LFTLIALLEE SGYMSRVVFL MDNVMRRFGL SGKSVVPLIS GAACAVPAVM 
IARNIENWKE RLITILVTPF MTCSARLPVY LIIINLVIPD GDFCWISYKA WTFFAMYFLG 
FAVALLSAFI LDKVLKMHKN SSFFIAEIPD YKIPLLRNVC LTVYEKTKGF VVGAGKFILA 
ISILLWFLGS HGVGEKYNSI EATAEQLAQT HQWTAEQKAH YIEAQSLEYS FLGYIGKGIE 
PVFRPLGYDW KISIGVVASF AAREVFISTL STVYSLGKDL DTEGEEGERT ILTKMRAEVR 
PDGTPVYTLG TGISLLLYYA FAMQCLSTVA VVRKETNSWK WTAIQWIFMT GVAYVSAMLA 
FILIR