Gene Coch_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1071 
Symbol 
ID8367493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1268304 
End bp1269656 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content32% 
IMG OID644983499 
Producthypothetical protein 
Protein accessionYP_003141187 
Protein GI256819908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.86342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TAATATTCAC ACTAATAGTA TTGGCAACAC TGGTTGCTTG CCAAAAGAAC 
GAACCCGATA GCTTGTTCGA CAAGAACCCT TCGGAACGTT TTGAAGAAAG TCAAGCCGAA
TTGCGCAAAG AACTTACTAC TGCTCAGCAA GGCTGGAAAC TTACCTATTT TACAAACGAT
AAAAAGTTTG GAGGTTTCAC TTTCTTGATG AAATTTACCC CTGAGGGGTT AGTAGAAATG
AACTCTGATA TGGGATTAAC CTCTTCTTCT ACTACTAGTA AATATGAAAT ACAAGAGGGG
CAGGGTACTA TGTTGGTATT TACTACCAAG AATTATATTC ACGAACTTTC GGATGCCTAT
ACACCCACGG ACTTACGAGG TAAAGGTTAT GAAGGAGAAT TTCAGTTTAT TTATCACGGC
AAAGAAGGTA ACAAACTTAA ATTTAGAACT CAACGCAAAG CTACTGAACA ATATGTATAT
TTTGAACCCG CTACAGCAGA AGATTGGAAT AATATACATA ATACAGCAAC AAATGTAGCA
TTACCTATGA TAACTCTTCG TCCATTTAAT TTTTATTTTA GGGTAACTAC TAACGCAGGA
AATGAAGATT ATGATATATT TCTTTATCAC AGATTTTTAA CTCTTACTTC TTTTTCTAAT
CCAAGTAAAG TGCTAGAAGT TTCTTTATCA CCTTCTGCTA ATAAATTAGT TTTTGCAAAA
CCTTTAGTTG TAGAAGGCAA AACTTTTAGA GAAATGACAC TTGATAGTAG TGGTTCATTA
CCAAGATATT TTGCGACGGT TGATGGAGTA AGTATAGAAA TATTAGCAGG TAATATTACT
GAGGAACATA TTAATAACGA TTACCAAAAT ATAGGAACAA AGGTTACACA ATTTATATTT
TTGACCAGTC CTTTGGGGAT TCAGACAGCA AATACATATA CTTCTAATGC CTTTATTAGA
AATTTTCTGA TGATAAATAC TAATAATTAT TTTGCTCGTA TAGATTTCTC ATTCAGCAAG
ACAGGAAAAT GTGATATAGT TCTATTCTAT GCTTTTCCTA ATATGGGAAA CTATTCTAAA
CGTGTCTATA CTTATGATTA TACTTTAACA GATAAGCGTT TATACTTAAC TAATCCTCAA
TTTAAAGAGC AAACAGATGA AAATCTTTGG AATGACTCTG CAAATGTAGC TATACTAAAC
GCTTCTAATA GAGTGTTTAA TAATATTACA ACAGTAGCAA CTAATGGTTT CTATATAAAG
AAACTCCCTC TTAAATTGAA ATATTCCAAT GTTATCTATT TATTGCAAAG TTCGACCTAT
TCTAATATTT CTTTTCCTGT ATATGTAAAT TAG
 
Protein sequence
MKKIIFTLIV LATLVACQKN EPDSLFDKNP SERFEESQAE LRKELTTAQQ GWKLTYFTND 
KKFGGFTFLM KFTPEGLVEM NSDMGLTSSS TTSKYEIQEG QGTMLVFTTK NYIHELSDAY
TPTDLRGKGY EGEFQFIYHG KEGNKLKFRT QRKATEQYVY FEPATAEDWN NIHNTATNVA
LPMITLRPFN FYFRVTTNAG NEDYDIFLYH RFLTLTSFSN PSKVLEVSLS PSANKLVFAK
PLVVEGKTFR EMTLDSSGSL PRYFATVDGV SIEILAGNIT EEHINNDYQN IGTKVTQFIF
LTSPLGIQTA NTYTSNAFIR NFLMINTNNY FARIDFSFSK TGKCDIVLFY AFPNMGNYSK
RVYTYDYTLT DKRLYLTNPQ FKEQTDENLW NDSANVAILN ASNRVFNNIT TVATNGFYIK
KLPLKLKYSN VIYLLQSSTY SNISFPVYVN