Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1071 |
Symbol | |
ID | 8367493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1268304 |
End bp | 1269656 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644983499 |
Product | hypothetical protein |
Protein accession | YP_003141187 |
Protein GI | 256819908 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.86342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TAATATTCAC ACTAATAGTA TTGGCAACAC TGGTTGCTTG CCAAAAGAAC GAACCCGATA GCTTGTTCGA CAAGAACCCT TCGGAACGTT TTGAAGAAAG TCAAGCCGAA TTGCGCAAAG AACTTACTAC TGCTCAGCAA GGCTGGAAAC TTACCTATTT TACAAACGAT AAAAAGTTTG GAGGTTTCAC TTTCTTGATG AAATTTACCC CTGAGGGGTT AGTAGAAATG AACTCTGATA TGGGATTAAC CTCTTCTTCT ACTACTAGTA AATATGAAAT ACAAGAGGGG CAGGGTACTA TGTTGGTATT TACTACCAAG AATTATATTC ACGAACTTTC GGATGCCTAT ACACCCACGG ACTTACGAGG TAAAGGTTAT GAAGGAGAAT TTCAGTTTAT TTATCACGGC AAAGAAGGTA ACAAACTTAA ATTTAGAACT CAACGCAAAG CTACTGAACA ATATGTATAT TTTGAACCCG CTACAGCAGA AGATTGGAAT AATATACATA ATACAGCAAC AAATGTAGCA TTACCTATGA TAACTCTTCG TCCATTTAAT TTTTATTTTA GGGTAACTAC TAACGCAGGA AATGAAGATT ATGATATATT TCTTTATCAC AGATTTTTAA CTCTTACTTC TTTTTCTAAT CCAAGTAAAG TGCTAGAAGT TTCTTTATCA CCTTCTGCTA ATAAATTAGT TTTTGCAAAA CCTTTAGTTG TAGAAGGCAA AACTTTTAGA GAAATGACAC TTGATAGTAG TGGTTCATTA CCAAGATATT TTGCGACGGT TGATGGAGTA AGTATAGAAA TATTAGCAGG TAATATTACT GAGGAACATA TTAATAACGA TTACCAAAAT ATAGGAACAA AGGTTACACA ATTTATATTT TTGACCAGTC CTTTGGGGAT TCAGACAGCA AATACATATA CTTCTAATGC CTTTATTAGA AATTTTCTGA TGATAAATAC TAATAATTAT TTTGCTCGTA TAGATTTCTC ATTCAGCAAG ACAGGAAAAT GTGATATAGT TCTATTCTAT GCTTTTCCTA ATATGGGAAA CTATTCTAAA CGTGTCTATA CTTATGATTA TACTTTAACA GATAAGCGTT TATACTTAAC TAATCCTCAA TTTAAAGAGC AAACAGATGA AAATCTTTGG AATGACTCTG CAAATGTAGC TATACTAAAC GCTTCTAATA GAGTGTTTAA TAATATTACA ACAGTAGCAA CTAATGGTTT CTATATAAAG AAACTCCCTC TTAAATTGAA ATATTCCAAT GTTATCTATT TATTGCAAAG TTCGACCTAT TCTAATATTT CTTTTCCTGT ATATGTAAAT TAG
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Protein sequence | MKKIIFTLIV LATLVACQKN EPDSLFDKNP SERFEESQAE LRKELTTAQQ GWKLTYFTND KKFGGFTFLM KFTPEGLVEM NSDMGLTSSS TTSKYEIQEG QGTMLVFTTK NYIHELSDAY TPTDLRGKGY EGEFQFIYHG KEGNKLKFRT QRKATEQYVY FEPATAEDWN NIHNTATNVA LPMITLRPFN FYFRVTTNAG NEDYDIFLYH RFLTLTSFSN PSKVLEVSLS PSANKLVFAK PLVVEGKTFR EMTLDSSGSL PRYFATVDGV SIEILAGNIT EEHINNDYQN IGTKVTQFIF LTSPLGIQTA NTYTSNAFIR NFLMINTNNY FARIDFSFSK TGKCDIVLFY AFPNMGNYSK RVYTYDYTLT DKRLYLTNPQ FKEQTDENLW NDSANVAILN ASNRVFNNIT TVATNGFYIK KLPLKLKYSN VIYLLQSSTY SNISFPVYVN
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