| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1058 |
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| Symbol | |
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| ID | 8367480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1255652 |
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| End bp | 1257055 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983486 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_003141174 |
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| Protein GI | 256819895 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0183593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACAA ACGTAGAAAA TGCGAAAAAG AAGCACCCTA AGGGGCTTTA TTTGGTGTTC
CTAACAGGTA TGTGGGAGCG TTTCAGTTAC TATGGAATGC GTGGTATTTT GATGTTATAC
CTCACCAAGA CGTGGCTTGA AGGCGGTTTG GCTTTCGATA AAGCTACAGC GAGTCTTATC
TATGGCTTTG CCACAGGACT TACCTATTTC ACCCCGCTAA TTGGCGGTTG GATAGCCGAT
AACTTTTTAG GACAACGCAG GGCAGTATTG TTAGGGGGAC TCATAATGTT CTTCGGTGAG
TTTGCGTTGT TCTCTATAAA CACTCACTTT GGCTTATATT TAGGGCTATT TTTGTTGATT
ATAGGTAACG GGTTCTTCAA ACCGAATATT TCAGCCTTGG TAGGAGGACT CTATGAATCA
GGTGATAAAC GTTTAGACTC GGCTTTCTCG ATTTTCTATA TGGGTATTAA CTTAGGGGCT
TTCTTAGCAC CACTCATTAC TGGATTCCTT ACTGATAACA TCTTTGCTAC TCACGGTGTA
GATGCACAAG GAAAAGAAAT AATCCTTTCT TACGGTTATA GATATGGATT CTTGGCAGCT
GCTATCGGTA TGCTTATAGG AGAGTTGATA TTTGTTTTCT TTGCACAGAA ATACTTAGGC
GACCTTGGAT TGCAACCAAA AGGTGGTAAG AAAAAAGTAC AAGAACTTTC GGAAGCCGAA
GTGCAAAAAC CACTTACCAA AGAAGAAAAA GAGCGCATTG CTGTTATCTT TATTTATTTC
TTCTTTGCCA TCTTCTTTTT TGCAGGATTT GAGCAAGCGG GCTCTTCGCT TACCCTTTAT
ACCGATAACT ATATCAACAG GACGGTGATG GGCTTTGAAA TTCCTACTGC TTGGTTCCAA
TCAGTAAACC CATTGTTTAT TGTATTGTTA GCACCGGTAT TTGCATCGTT TTGGGGTACT
AAAATGGGAC AACGTCTCAC TACTCCGTTT AAAATGGGAA TGGGAATGAT ACTCTTAGGG
GTAGGGTTCT TCTTTATGCT TGGCGCTGTT TACGAGCGCG GTGGCTCTAT AGGGGTAGAC
CCTAAAGATA TAGCAGTGAA AGCGAGCTTA GCTTGGTTGG TGCTTACTTA CCTTACTCAT
ACCATTGGTG AGTTGTGTTT ATCACCCGTA GGACTTTCTA CGGTTACAAA ACTTTCACCT
CCGCGTTTAG CAGGACTTAT GATGGGTGTT TGGATGATGG CTGCTTTCTT CGCCAATGCA
GCAGGAGGAG TGATTGCTTC TTACGTAGAG AAACTTGGGG CAAGTGTAGT ATTTGCTGCG
GTTTCAGGAT TTGTAATCCT CTGTGGTTTA GGAATGATAC TCCTTAACAA GAAACTTCAA
GCGATGATGC ACGGAGTAAA ATAG
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| Protein sequence | MDTNVENAKK KHPKGLYLVF LTGMWERFSY YGMRGILMLY LTKTWLEGGL AFDKATASLI
YGFATGLTYF TPLIGGWIAD NFLGQRRAVL LGGLIMFFGE FALFSINTHF GLYLGLFLLI
IGNGFFKPNI SALVGGLYES GDKRLDSAFS IFYMGINLGA FLAPLITGFL TDNIFATHGV
DAQGKEIILS YGYRYGFLAA AIGMLIGELI FVFFAQKYLG DLGLQPKGGK KKVQELSEAE
VQKPLTKEEK ERIAVIFIYF FFAIFFFAGF EQAGSSLTLY TDNYINRTVM GFEIPTAWFQ
SVNPLFIVLL APVFASFWGT KMGQRLTTPF KMGMGMILLG VGFFFMLGAV YERGGSIGVD
PKDIAVKASL AWLVLTYLTH TIGELCLSPV GLSTVTKLSP PRLAGLMMGV WMMAAFFANA
AGGVIASYVE KLGASVVFAA VSGFVILCGL GMILLNKKLQ AMMHGVK
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