Gene Coch_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1039 
Symbol 
ID8367460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1234759 
End bp1235445 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content36% 
IMG OID644983466 
Producthypothetical protein 
Protein accessionYP_003141155 
Protein GI256819876 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGA TAAAACTACT TTTTGCAATT GCAACATTTT TCCAAGCTTT TGCACAAGCA 
CAAATAACAT TGGGTATGGA AGTCAAAGCT GGGGTAACAG GTGCTGGTCT TTATGACAAC 
ACTGCTCCTA ATTACTACAC GAGGAGTGTA GCAGGAGTAC AATTAGGCAC TTTAATAAGC 
GCTGATTTCC CAAGTGGAAT AGCTCTTGAA ACAGGATTGA TGTATACGGG TAAGAATTTT 
GCCTATGATT TCAAAAAATA CCCTTCTGAA TCTAAACGAA AAGATGGAAC CTATTTGCGT 
GAACAAGTTT TTAACAATCA CTATTTAGAA ATACCTTTTA ATATCGCTTA CAGATTGCGA 
GCTCGCAAGT TGCGCTTTGT GTGGAAAGCA GGACCTTATA TAGCAACTAA TTTTGCAGCT 
AATACTCGTG AAACGTGGGA ACATTACAAA GATAGTTTGT TTACGCACGT GTCAAAGAAG 
AAATACACGC GACATATAGG AAGTAAATCT ACAGATGATG TAAAGCTTTT TGATGTGGGC 
TTCAACATAG GAACAGGTAT AGAAGTAGAG CGTTTTACAA TAGGTATACA ATATGGTGTT 
GGACTAATGG ACATATTGCC CAGCAATGAA GCTGAATATT TAAAAAACAG AGTATTTGTA 
TTTGCAGTAG GTTTTAGAAT TAAATAA
 
Protein sequence
MIKIKLLFAI ATFFQAFAQA QITLGMEVKA GVTGAGLYDN TAPNYYTRSV AGVQLGTLIS 
ADFPSGIALE TGLMYTGKNF AYDFKKYPSE SKRKDGTYLR EQVFNNHYLE IPFNIAYRLR 
ARKLRFVWKA GPYIATNFAA NTRETWEHYK DSLFTHVSKK KYTRHIGSKS TDDVKLFDVG 
FNIGTGIEVE RFTIGIQYGV GLMDILPSNE AEYLKNRVFV FAVGFRIK