Gene Coch_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1038 
Symbol 
ID8367459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1234029 
End bp1234703 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content39% 
IMG OID644983465 
Producthypothetical protein 
Protein accessionYP_003141154 
Protein GI256819875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA CAAAACTATT TTTAGCTGTA ATGTTATTCA GCAGTATAGC GATGTTACAG 
GCACAGGTAA AGCCAGGTTT AGAAGTGAAA ATAGGAGGCA ATATAGCAGG ACTTTATTAC 
GCCGATTCTT CTAATAGTGA TAGAACTTTT ACTCCAGGTT TTCATACGGG GGCGTTGTTC 
AGTTTGAACT TCCCTACTGG ACTCGCTCTT GAAACAGGTT TAATGCTCAA CACCAAAGGG 
CAAGCCTATG AGTATAAATA TAAAGACGGC AAAGAAAAAC AAATCAGTGA GTTGCATTAC 
ACTTATGGTT ACTTAGAGAT GCCTTTTTAT GTAGGCTATA AACTTAAACT CAGGAATGTG 
AAACTCGTTT GGAAAGCAGG TCCTTATGTA GCAGCAGCTT TATGGGGCAA TAGTCGTGAA 
GAATGGGCTT ACTACAAGAA AGATAAGTTA AAGGACTATA AAGTAACCAA TCGCCATTCC 
CTCAGCATAG GTAATCGTTC TTCTGATGAT TTACGCCCTT TTGATGCAGG ATTAAACTTA 
GCCACAGGCG TAGAAATCAA ACGATTTACA GCAGGTATTC AGTACGGTAT TGGTTTCAGC 
GATGTGCTCC CTAACCGTTC TGAGAGTACC TCAAACCAAG TGTTTAGCCT TTCAGTAGGA 
TATAGAATAT TTTAA
 
Protein sequence
MKRTKLFLAV MLFSSIAMLQ AQVKPGLEVK IGGNIAGLYY ADSSNSDRTF TPGFHTGALF 
SLNFPTGLAL ETGLMLNTKG QAYEYKYKDG KEKQISELHY TYGYLEMPFY VGYKLKLRNV 
KLVWKAGPYV AAALWGNSRE EWAYYKKDKL KDYKVTNRHS LSIGNRSSDD LRPFDAGLNL 
ATGVEIKRFT AGIQYGIGFS DVLPNRSEST SNQVFSLSVG YRIF