| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1028 |
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| Symbol | |
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| ID | 8367448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1215793 |
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| End bp | 1221267 |
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| Gene Length | 5475 bp |
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| Protein Length | 1824 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644983454 |
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| Product | alpha-2-macroglobulin domain protein |
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| Protein accession | YP_003141144 |
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| Protein GI | 256819865 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TAAGCTTTGT ACTGATAGCG TTGTTGGTCG CTATCGCTTG TAAGAAGAAT
GTAAATTTCA ACAGCGACCC ACTAGCTTTT AAAGATTATA TTTCAGGGTA TACCTCAGGG
CTTATCTCTG CTCACTCAGG AATAAAAATA CTACTGAACG AACCCTTGTC GCAAGACAAA
ATGGACAAGG TGAGCGACCT TAACCTCTTT GAAATTTCGC CTAAGGTGAA AGGAAAAGTG
GTGTGCGTAA ACCCTACACT TGTAGAGTTT ATGCCTGAAA AACCATTGGC TCAAAACACA
GAGTACCGCG TGTCGTTTCA CGTAAAGAAG CTCTATGCAG TACCAAAAAA GGAACTGGAG
ATTTTCAACT TTACAGTGAA AACTTTTCAA CAAGCCTTTC GAGTAAGGTC AAACGAGTTA
CAGTCGTATA ACCGTGATTA TTATTTTCTT AGTGCTGAAC TCTTGGCTAA TGACCAAATA
CCTTACGAAA CCGCTAAAGA GATTTTAAAA GCGACTCTTG ATGGGAAGAA AGTAGGAGTG
AAGTTCCAGT CGCAAGGCAC TAATAACAAG TTTGTAATTA TCTTCGACAG CTTGCCTCGT
CTCAACAAAG AACAAACTCT CCAAATAAAA TGGGACGTTA AAGACATACC TAAAGAAAAC
CTTATACCTT TCTCTTATAC TATTCCGCAA AAGGGGGTAT TCAAGGCACT GAACGCTAAA
ACCGACGGTG CCAACCAGGC TTTCAGTGTA AACTTTTCTG ACCCCTTAGA AAAAGAACAA
GATTTTACAG GACTCATAAG CCTCAGCGAT ACCAATACTG CACTGAAATA CAGCGTAAAC
GGCAACGTAG TGAAAGTCTT CCGCGAGGAA CAAAAAGAGG GTGACTACAA GGTGCACATT
TCTAAAGGTA TCAAGAATAT CTATGGCGAC CGATTGGAAA AAGAAGCGAC TTTTGACATC
AAATTTTTAC AGCAAAAACC CGATATTCGC TTTCTTAAGA GCGGTACTAT CCTACCGAGC
TCACAGAATT TGAAAATCAA CTTTCAAACT ATTAACTTGC GCGCGGTGAA TGTAACGGTA
TACCGCATTT TCGAGAACAA TATCTTTCAG TTTTTACAAG ATAACGATTT GGGCGGAGGC
TCGTATATAC AGCGTGTAGG CAAGCCTATT GCACGGAAAG TACTCAAACT GAACGACAGT
GCGCTCTATC CGCTGAACGA GTGGAATACT TATTCGCTCG ACCTTGCTTC GGTGATTACG
CCCGAACCAG GGGCAATTTA CCGAGTAGAA TTAGGAATGA CCAAAAACTA TTCACTCTAC
GCTTGTGGTG CTAAAAACGA AGAACCTCTT GACCTTTCGT TTGAACAAAA ACCATTAAAT
GACGACGATG TAACCTACTC TCAATACTAT GATTACGACG AAGAATTCTA TTGGGAAGAA
GACGAGGATA GTCCTTGTAA AGACAATTAT TACTACGGCA GAACGGTGGG TACCAATGTG
CTTGCTTCCG ACCTTGGAGT GATTGTAAAA AAAGGACAAA CGAACAACTT TACCATAGTA
GTAAACGACT TGCTCACTAC CAAACCAGTA GTTGGAGCAA TAGTAGAGGT TTTCAGCTAC
CAACAGCAGA AAATACAAGA AGGCAAAACC GATAGTAAGG GAATACTACG GTTAAATCTC
AGTAGCCGTG CTTACTTTGC CAAAGTGAAA AAAGACAAAT TCACTACTTA TGTGAAGTTA
GACGACGGCG CACCACAGTC GGTAAGCAAA TACGATGTAG ATGGTATGCG CTTACAGAAA
GGGCTCAACG GTTTTATCTA TACCGAACGC GGCGTATGGC GACCCGGTGA TAGCATTTAT
GTGGGCTTTA TATTGAACGA CTTTGCCCAA AAGACCCCTG AAAAACTGCC TATCAAACTG
CGCTTTACTG ACCCTTATGG AAAGGTGATA GCCGAGCGTA TGCAGAGTAG CAACCCTACC
AACCAGTATG TATTTGGACT GAAAACCAAC TCCGATGCGC CTACGGGCAA CTGGAATGTG
AGTATCTCGG CAGGGGCTAC AAAATTCAGC AAACGCATCA AGATTGAAAC CATTAAGCCT
AACCGCTTGA AGATAGAGAA CAACCTCAAC GGTAAACTTA TCAGTCAAAA AGGCGACAAT
GTGCGCTTGC AAGTGTTGTG GTTACACGGC TCTCCAGCAG GTAATACAGG TGTGAGCGTG
AAAGCGAAGT TCTACCCCTT AGAAACTGCC TTCAAAGGTT ATGAAAAATA CGTGTTCAAC
AATCGCGCTT ATCAGTTTGA GAGCGAAGAG ATGAACGTAT TTGAAGGGCG TACCGATAGC
AACGGGAATG CGAATTTCTA CTTCAGAACG AACGACTTAG ATGCTCCTGG TATGCTAAAA
GTGAACTTCC TCACCCAAGC CAACGAAAGT GGTGGCGATT TCAGTACCGA TGTGAGTACC
GCCTCTTTTT CACCTTATAG TGAGTATGTA GGTTTACGCT TGCCCGAAAC CAACAAATAC
GATTATTACA ACACCCAACA AAACCACACT TTCGATGCAG TAGTACTCAG CGAAGAAGGC
AAACCACTCA GCCATAAAGA TGTGTCGGTA ACCGTGTATA AAGTAGGCTG GAACTGGTGG
TGGGACGCTT CGAACCAGAA TATCTCTACC TATAATAGCA GTAGTAGCAA TGCTATTTAC
ACCACTAAAA ACATCACTAC CGACAGCAGT GGTAAAGCAC GTTTTACACT CAATATTCCG
GATGCCGACT GGGGTCGCTA TTTTATTATG CTCACTGATG ACCAAAGCGG TCATAAGTGT
GGCACGACTG CTTATTTTGA TTGGGGTGAC TGGACTGGCA AATCGCGTGG CAGTGAAGGT
AGTGAAGCGG TAATGCTCGC TTTGGGTACT AACAAAAAAG AATACAGCGT AGGTGAAAAA
GCTAAGATTA GTTTCCCGTC AGACAAAGGC GGTCGCGCGC TCATCTCGGT AGAAAACGGG
AACGATGTAC TCGAAACTCA CTGGGTAGAG ACCGCTAATA AAGAAACTAC TTTTGAGGTA
CCTATCACCA ATAAAATGAC GCCTAATATG TATTTTTACG TTACCCTCTT GCAACCTCAC
AACAAAACGC TCAATGATGC GCCTATACGC CTCTATGGGG TGATACCGGT GAAGGTGGTA
GACAAGAATA CCGTCCTCAA TCCTATAATC CAAATGCCCG ACCGATTGAT ACCTAACCAA
AAGGTACAGA TAAAAGTAAG TGAGAAATCG GGTAAACCGA TGACATACAC TTTGGCTATC
GTAGAAGATG GACTCCTAAA CCTCACCCGC TTCAAAACTC CTAACCCTTG GAATACTTTC
TTTAGCAAAA CTGCTCTTGG AGTAAAGACT TGGGACGTGT ACGATGATGT AATAGGTGCT
TATGGAGGTA CTATCAATCA AGCGTTCAGT ATAGGAGGAG ATGAAGATTT AGGCGGTGCC
GATGCACAGA AAGCAAACCG TTTCAAACCG TTTGTGATAT TTAGAGGTCC TTTTGAACTA
AAAAAAGGGG CAGCCAATAC TCATACCGTG AAAATTCCTA ACTATATGGG TTCTGCTCGT
GTGATGGTAG TAGCCAGCGA TGTAAAGGGC AATGCCTATG GTAGTGCTGA GAAAAAAGAT
ATACCTGTGG TGAGTCCGTT ATCAATTTTG GGTTCCTTAC CACGCAAAGC AGTGCCTAAC
GAGAAAATCG TGTTGCCGGT AACCGTTTTT GCTATGGAAA AACAAGTGAA GAACGTATCG
CTACAAGTAG AGACTAACGG TTTGTTTAAA GTAGTAAGCA CACGCAACCA ACAGTTGCAC
TTTGAGAAAA CAGGGGAGCA AATGGCTTAC TTTGAACTTG AAACCACCTC GCAAACGGGT
ATTGGTAAGG TGAAAATCAT TGCTACTTCG GGTAAGGAAA AAGCGACTTA TGAGGTGGAA
ATGGATGTGT ACAACCCTAA TCCTGTAACA TATGTAGTAC AAAACGCCGT ATTGCAGGGC
GGACAGTCGC ATTCTCTCAA TATCAATCTT TTTGGTGAAA AAGCCAAGAC TGTATTAGAA
GTATCGAGCT TCCCAGGGGT GAACCTTACC CAGCGTTTGG GTTATCTTAT CGCTTATCCG
CACGGTTGTA GCGAGCAACT CACCTCAGGG GCGTTTCCTC AACTTTTCTT AGCTGACTTT
GTAACCCTTT CTAAAGAAAA AGCCGATGAG GTGAACCGCA ATGTAAGTGC TACCATTAGC
AAATTGTATG AAAACCAACT CTCTAATGGA GGATTTACCT ACTGGAAAGG TGGCAAGTAT
GCCGATGATT GGGTAACCTC GTATATAGGT CAGTTTTTTG TAGAAGCCGA GAAGAAAGGT
TATGTATTGC CCTCAGGTAG CAAACAGCGT TGGCTCGACT ATCAGAACAA TGAGGCGCGC
CAATGGCGTT ACGAGGGTAA ATATCAAAAC GATTTTGCCC AAGCCTATCG CCTCTATACT
TTGGCACTCG CCGGAAATCC TAACATAGGC GCTATGAACC GCTTGCGTGA ACTCAGTGAG
CTCACTCCTA ACGCTAAACG CACTTTGGCA GCTGCCTACG CTCTTGCCGG ACAAAAGCAA
ACCGCTGAAA AGCTCTTCCT AACTACCGCT ATAGACGATG ATGCTGATAG CTATTACGGC
TCGGTGTTGC GCAATAAAGC AATGGCAATG GAAACCGCTT TGCTTATCGG TAGGAAAGAA
GATGCAGGAC GTTGGGCATT GGAGATTGCC GAAAAGCTCT CGACTAACGA TTGGCTCAGC
ACTCAAACTA CAGCCTATTC GCTTTATGCA ATGGCAAAAT ATGTACAGAA GAACAAGAGC
GGTAGAAATA TAGTAGCCAG TTATACTTTG GGTGGTAAAA CCGAAAACTT AAAATCTACC
GAGCCAATAC TACAGAAGAC GCTTGCAGCC AAAGGCAATG AGACTTTACA AGTGAAGAAC
AACGGCAACC AAACCCTCTA TGTACGCCTC ATTACCAGCG GTATATTACC TGTAGGCAAA
GAGCTCGCTA TGCAAAACGG ACTTTCGCTG AACACGACTT ACCGCGATAA CAACGGACAC
ACGCTTGATG TGACCAATTT GCGCCAAAGC ACTCAGTTTG TAGCTACTAT TGAGATTACA
AACCTCACAG GCGAGAGAGT AGACAATGTA GCACTTACCC AAATTATCCC TTCGGGCTGG
GAGATTGTAA ACACGCGATT TACGGATTAC GACGAAGGTG ATGGCAACGG TTATATAGAC
TACACTGATT TCCGTGATGA CCGTGCGAAT TTCTACTTGT CGCTGAAAGC CAAACAAACG
AAGTATATCA AACTCAAGCT GAATGCTTCG TATGCGGGAC ACTATTATCT GCCAGGTACT
TATGCTGAGG CAATGTACAG CAACCGCTAC AATACCCGTA CCAATGGTAG ATGGGTGGAG
GTAATTAGGA AATGA
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| Protein sequence | MKKISFVLIA LLVAIACKKN VNFNSDPLAF KDYISGYTSG LISAHSGIKI LLNEPLSQDK
MDKVSDLNLF EISPKVKGKV VCVNPTLVEF MPEKPLAQNT EYRVSFHVKK LYAVPKKELE
IFNFTVKTFQ QAFRVRSNEL QSYNRDYYFL SAELLANDQI PYETAKEILK ATLDGKKVGV
KFQSQGTNNK FVIIFDSLPR LNKEQTLQIK WDVKDIPKEN LIPFSYTIPQ KGVFKALNAK
TDGANQAFSV NFSDPLEKEQ DFTGLISLSD TNTALKYSVN GNVVKVFREE QKEGDYKVHI
SKGIKNIYGD RLEKEATFDI KFLQQKPDIR FLKSGTILPS SQNLKINFQT INLRAVNVTV
YRIFENNIFQ FLQDNDLGGG SYIQRVGKPI ARKVLKLNDS ALYPLNEWNT YSLDLASVIT
PEPGAIYRVE LGMTKNYSLY ACGAKNEEPL DLSFEQKPLN DDDVTYSQYY DYDEEFYWEE
DEDSPCKDNY YYGRTVGTNV LASDLGVIVK KGQTNNFTIV VNDLLTTKPV VGAIVEVFSY
QQQKIQEGKT DSKGILRLNL SSRAYFAKVK KDKFTTYVKL DDGAPQSVSK YDVDGMRLQK
GLNGFIYTER GVWRPGDSIY VGFILNDFAQ KTPEKLPIKL RFTDPYGKVI AERMQSSNPT
NQYVFGLKTN SDAPTGNWNV SISAGATKFS KRIKIETIKP NRLKIENNLN GKLISQKGDN
VRLQVLWLHG SPAGNTGVSV KAKFYPLETA FKGYEKYVFN NRAYQFESEE MNVFEGRTDS
NGNANFYFRT NDLDAPGMLK VNFLTQANES GGDFSTDVST ASFSPYSEYV GLRLPETNKY
DYYNTQQNHT FDAVVLSEEG KPLSHKDVSV TVYKVGWNWW WDASNQNIST YNSSSSNAIY
TTKNITTDSS GKARFTLNIP DADWGRYFIM LTDDQSGHKC GTTAYFDWGD WTGKSRGSEG
SEAVMLALGT NKKEYSVGEK AKISFPSDKG GRALISVENG NDVLETHWVE TANKETTFEV
PITNKMTPNM YFYVTLLQPH NKTLNDAPIR LYGVIPVKVV DKNTVLNPII QMPDRLIPNQ
KVQIKVSEKS GKPMTYTLAI VEDGLLNLTR FKTPNPWNTF FSKTALGVKT WDVYDDVIGA
YGGTINQAFS IGGDEDLGGA DAQKANRFKP FVIFRGPFEL KKGAANTHTV KIPNYMGSAR
VMVVASDVKG NAYGSAEKKD IPVVSPLSIL GSLPRKAVPN EKIVLPVTVF AMEKQVKNVS
LQVETNGLFK VVSTRNQQLH FEKTGEQMAY FELETTSQTG IGKVKIIATS GKEKATYEVE
MDVYNPNPVT YVVQNAVLQG GQSHSLNINL FGEKAKTVLE VSSFPGVNLT QRLGYLIAYP
HGCSEQLTSG AFPQLFLADF VTLSKEKADE VNRNVSATIS KLYENQLSNG GFTYWKGGKY
ADDWVTSYIG QFFVEAEKKG YVLPSGSKQR WLDYQNNEAR QWRYEGKYQN DFAQAYRLYT
LALAGNPNIG AMNRLRELSE LTPNAKRTLA AAYALAGQKQ TAEKLFLTTA IDDDADSYYG
SVLRNKAMAM ETALLIGRKE DAGRWALEIA EKLSTNDWLS TQTTAYSLYA MAKYVQKNKS
GRNIVASYTL GGKTENLKST EPILQKTLAA KGNETLQVKN NGNQTLYVRL ITSGILPVGK
ELAMQNGLSL NTTYRDNNGH TLDVTNLRQS TQFVATIEIT NLTGERVDNV ALTQIIPSGW
EIVNTRFTDY DEGDGNGYID YTDFRDDRAN FYLSLKAKQT KYIKLKLNAS YAGHYYLPGT
YAEAMYSNRY NTRTNGRWVE VIRK
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