| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1020 |
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| Symbol | |
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| ID | 8367440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1201229 |
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| End bp | 1203982 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983446 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003141136 |
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| Protein GI | 256819857 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.111548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATA AACATAACAT ATTATTTTGT AGCCTTGTGG GCTGTATGCT TTGGGCAGGT
GCTATGCAGG CACAAAGCCC TCTGAACGTA CCCGAAGAAT TGTCTACGCT TTCTACCTCA
TCAGTAAAAG GAGAACAACT CTTGAAAATG CCCACAACGA ACTTTACCAA CAGTTTGTTT
GGGTTGCTAC CTGGACTCAC TGTATTGCAA GGCGGAGGAA TGGACAATGC CAGCCTAAAT
ATCCGCGGGT TAGGTTCGTA CAACTACCCT TCGGTTACCT ATTTTATCGA TGGTTACCAA
AGTGATTTTA TACTGCTATC GCCTTCCGAA ATCGAGTCGA TTACAGTTTT GAAAGATGCG
GCTGCCTTAG CACCTTTTGG TATGAAAGGC GCGCACGGCA TCGTGTGGAT TACCACCAAA
CGCGGAGCAG AAGGCAAGCC TGTGGTAGGG GTAGATTTCC AAACAGGCGT ACAAATGCCT
ACGGTACTGA GCAAACCGCT ATCGGCTACC GAGTATGCTC AGCTATACAA CGAGGCTTAC
AGTAACGATG CAGGTGCTTG GACAAGCTTT TACAATATCC CTAACGATGT GAAATACAAC
ATCGATTGGT ATGACAAAGT GCTCAAAAAG TCGGCTTTGT TTGATAGGCA AGATGTGAGC
ATACGCGGAG GCTCGGCTAC TACTAAGTAT TTTGTGCTAT TAGGGCACGC CGGCAATAGT
GGTTTGTATG CCTCTAAGAA CGACGATTCG CATTCCAGCG GAAGGTTCGA CCAATATCTC
GTAAAGGCAA ATTTAGATTT CAGTATGCTC AAAATATTTG AAGGAAATGT AAATATCAAC
GGACGTATAG AAGACCGTAA ATCGCCTAAT TACAACGAGT ATAAGCTCTG GCAAAACTTG
GCGAGCTACC CTAATATCAT TTATCCAGCG CAAAACCCCA ATGGGTCGTT CCCTGGTACA
GCCATCCACC CCGATAACCC TTACGCTTCT ATCCGAGCCT TAGGTATCAA AACCCTACAC
GACCGCACTT TAGGGGCTAA TTTCAACCTA AAAGAGAAAT TAGACTTCAT CACCCCTGGG
TTGTACATAC AACAAGGCGT ATCGCTCAGT TCGTGGACAC GAGGTACGCG CATTGTAAGT
AGAGATTACA CTCGTATGTT CAATGGGGCA GCACAAACCA CTCATCGCGA TAGCAACTAC
AAAGTAGACG ACGACTGGGG TACCAACCAA TGGAACCGTT TGCAGTTGCT GTTGGGTGCA
GGTTATGCCC GTGAATTTGG GCAAAACACT TTCCAAACAG CGGTAAACTA CCTTCAATAC
GTTTATAATA TAGACGACAA TCTCAACGGC AAAGCAGGCT TGAACAACAA CTACGCCTAT
CAGAACATTG GCGGACGTGT GTTCTACGAT TGGAACAAAC GCGTATCGGC TGAATTTGGT
TTTGCCTTCG GTGGATCGGA TAACTACAAG AAAGGCAATC AGTTTGGTTT TTATCACGCC
CTTTCAGCAG CCTATCAGGT TTTCAACGAG CAACACCCTT CGGCGAATGC CAATATCAAT
CGGTTGAAAT TGCGCGCTTC GGTAGGTACT ACGGGTAACG ATGTCTACAA CGAAGGTCGC
TACTTATACG AACGTTATTA CGGTTCTTAC GGAGGAGGCG GTTTTGCCAC AGGAAACGAC
GATCCGTCGT GGCATAGTGC TATCGGACTA AAATACGTAC CTAATGAGCG TATTTTTGCC
GAAAAAGCCT ATAAGTACAA CATAGGCGTG AAAGCTAAAT TCTTTAACAA ATGGGACGTG
ATGATAGAGG CTTTCCTCAA CAAACACGAA GGTATTATCA CCCCTGATTA CAGTATTTCG
GATATCTTTG GGGCTACCCC TCCCTATAAA AATATAGGAA AGGTAACTAA CCGAGGTTTT
GAAGTGAGTA CGCTCTACAG CAATGCAGCA GGAAAACTCA CTTATAGTAT AGGCGCTAAT
GCTTCGTATG CTAAAAACAA AATAGATTAT ATGGCTGAGT ACGATGCTAG CAGCGAGAGT
TCAGCTCAAA CAGGCAGACC TATCGGCACA CGCTTTGGCT ATGAAGCTAC GGGCTTTTAC
GACATAAACG ATTTTGACAG CAATGGCAAC CTGCTACCTT CACTCCCTAA ACCTTCCTTT
GGAAACGTTG CCCCTGGTGA TGTGAAATAC CGCGACCTAA ATGGTGACAA CCGTATAGAC
CCTGCCGATA AAACCGAAAT AGGCAAAAGC TACCTCCCTA CACTCACTTA TGCTGGTACA
ATCAACCTCG GTTACGAAGG ATTTGACCTT GGAGTGCTTG TGCAAGGAGT ACAAGGCAGA
GAGGTGAATT TATTAGACGA TGCACGCCAA AAAACAGTTG CTTTCGAGAA CAATGGCAAT
GTGTATGCTA TCGCCAAAAA CCGCTGGGCT TACTATCCTG CACAAGGCAT CGATACCCGT
AGTAGCGCCC AGTACCCACG TTTGTCGTTA TTGAGTAACA ACAATAACAC CCAGCCTTCC
ACCTTGTGGA TAAAGAAAGC TAATTACCTA AGAGTACGCT ACATAGAGTT AGGTTACAGC
GTTCCTAAAC GAATGCTCGA CGAGATAGGC GTTAGCAAAT TGCGCATTTA CGTAAATGCC
GCCAATTTGT TTACTTTCTC ATCACTGCTT ACCGATTACG ACTTAGACCC CGAAGTGTTA
TCGGGTTACC CTGCCCTCAA ATCGGTTACT ATGGGTGTGT CTTTAAAGTT TTAA
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| Protein sequence | MKYKHNILFC SLVGCMLWAG AMQAQSPLNV PEELSTLSTS SVKGEQLLKM PTTNFTNSLF
GLLPGLTVLQ GGGMDNASLN IRGLGSYNYP SVTYFIDGYQ SDFILLSPSE IESITVLKDA
AALAPFGMKG AHGIVWITTK RGAEGKPVVG VDFQTGVQMP TVLSKPLSAT EYAQLYNEAY
SNDAGAWTSF YNIPNDVKYN IDWYDKVLKK SALFDRQDVS IRGGSATTKY FVLLGHAGNS
GLYASKNDDS HSSGRFDQYL VKANLDFSML KIFEGNVNIN GRIEDRKSPN YNEYKLWQNL
ASYPNIIYPA QNPNGSFPGT AIHPDNPYAS IRALGIKTLH DRTLGANFNL KEKLDFITPG
LYIQQGVSLS SWTRGTRIVS RDYTRMFNGA AQTTHRDSNY KVDDDWGTNQ WNRLQLLLGA
GYAREFGQNT FQTAVNYLQY VYNIDDNLNG KAGLNNNYAY QNIGGRVFYD WNKRVSAEFG
FAFGGSDNYK KGNQFGFYHA LSAAYQVFNE QHPSANANIN RLKLRASVGT TGNDVYNEGR
YLYERYYGSY GGGGFATGND DPSWHSAIGL KYVPNERIFA EKAYKYNIGV KAKFFNKWDV
MIEAFLNKHE GIITPDYSIS DIFGATPPYK NIGKVTNRGF EVSTLYSNAA GKLTYSIGAN
ASYAKNKIDY MAEYDASSES SAQTGRPIGT RFGYEATGFY DINDFDSNGN LLPSLPKPSF
GNVAPGDVKY RDLNGDNRID PADKTEIGKS YLPTLTYAGT INLGYEGFDL GVLVQGVQGR
EVNLLDDARQ KTVAFENNGN VYAIAKNRWA YYPAQGIDTR SSAQYPRLSL LSNNNNTQPS
TLWIKKANYL RVRYIELGYS VPKRMLDEIG VSKLRIYVNA ANLFTFSSLL TDYDLDPEVL
SGYPALKSVT MGVSLKF
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