| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1016 |
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| Symbol | |
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| ID | 8367436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1194534 |
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| End bp | 1196951 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644983442 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003141132 |
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| Protein GI | 256819853 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCTAT GGCTTGCTCA CCCCATCTAT GGGCAAGCCA TTAGGGAGCA TATATTGTTA
GATAACGGTT GGAAATTCAG CTTAGGGCAC GCTACCGACC CTACTAAAGA TTTGTTTTAC
CGCGTGTATA ACGACTTCTC TAAAACACTT TCCAAAGGCA TTAACTTTTC GAGCATAGAC
TACGACGATA GCGCGTGGCA AACCGTAGAC CTCCCTCACG ATTGGGCAGT AACTCTCCCT
TTCAGTGAAA AAGGCGATTG GTCTCACGGA TATAAAGCCT TAGGCAGTAC CTTCCCCGAG
CATAGTATTG GTTGGTATAG AAAAACCTTT GACCTCAGCA AATCCGAAGC AGGCAAACGC
ATCGAACTGC AATTCGACGG TATTTTTAGG GACAGTCGGT GTTGGGTAAA TGGCATTTAT
GTAGGGCATC ACCTCAGCGG GTATACAGGA ATAAAGTACG ATATTACCGA TTTGGTGCAT
TTTGGCAAAC CCAACGTGAT TACCGTAAGG GTAGACGCTA CCCAAAACGA AGGTTGGTTT
TACGAAGGCG CAGGTATCTA TCGACACGTG TGGCTAAACT CTTACAACTC TGTTCACTCT
TCCCCCGAAG AGGTTTTTAT CTATACCAAA AGCATTGGCA AACAAGCCGA AATGCACGCC
GAAGCCACTG TGCATAACCG AGAAACAAGC TCACAAACTT TTCAGGTGGA ATGGAGTATT
CTTAATCGTG AAAAGAAAGT AATAGCTACT CACAAATCTG CAAATACTAC TTTTGCCCCT
AATGAAAAAG TAACTGTAAA GAGTAACCTT AACATTCCTA ATGCACAGCT TTGGGACACT
GAGCACCCCT ATCTGTATAC CTTAACAACG AAAATCATTT CCAACGGAAA GACCACCGAC
CTTATTCACA CCCGCTTTGG GGTGCGCACT TTTAGTTATC AACCCGACGG CTTTTACCTC
AACGGCAAAA AAATGAAAAT AAAAGGCGTG TGCGTACATC AAGACCACGC CGGAGTAGGT
ACTGCACTAT TAGACGAATT GCAGTATTAT CGTATTGGGT TACTCAAAGC AATGGGCGCC
AATGCCTACC GCACTGCCCA TCACCCTCAT AGCCCTGCCG TGCTACAAGC CTGCGACAGT
TTGGGTTTAT TAGTGATGGA CGAAACCCGA CTCTTAAACA GCGGAAGAGA ATACCGTCAA
CAATTTGAAG ACCTTATCAA GCGCGACCGC AATCACGCTA GCGTATTTAT GTGGTGTATC
GGGAATGAAG AAGAAAAAAT ACAAAGTACC GAAACTGGCG AGCGCATCGC TCGTACGTTG
GTGAGTTTAC AACAGCATTT AGACCCTTCA CGCGTGAGCA CTTATGGCGC CAACGTAGGT
AATGAAAATG AAGGTGTGAG TGCTGCCATA CCTGTACGAG GCTTCAATTA CAACCTCTAT
GGGCTTACCG ACTATGAAAA AACACACCCT AATCAACCTA TCATCGGCAC CGAAGTAGCC
AGCACCGTGG GTACTCGAGG GGTGTATCTG CCGGAAATCG TACTTGACAA AGCAGGGGGG
TACAGTGGTC ATTTTGTAGC CGATACCCTA CGCGCTTACC TGCTCGACCA AGACAAGAGT
TACCCCAGTT GGGCATCACA AGCACAGCAA TGGTACAGCA CGACTGCTAA CGACCCTCGT
TTTATGGGAG GTTTCGTATG GACGGGCTTC GACTATCGCG GAGAGCCTAC CCCTTTTGCG
TGGCCTAATA TCAGTTCGCA TTTTGGGGTA ATGGACGTGT GTGGTTTCCC TAAGAACGTG
TATTACTACT ACAAAGCCCA TTGGAGTGAA TCGCCTATAT TGCACATAGC CCCTCATTGG
AATCTGAACC TGCCCCAAGG CACTGTGGTA AAAGTGTGGG TATATAGCAA TACCGAAGAA
GTGGAACTTT TCTTGAACGG AAAGACGCTC GGTAAACAAA AAACACCTGC TTTTGGACAC
TTATATTGGG AAGTACCCTA CGAAAAAGGT ACGCTGAAAG CCGTAGGCAC TAAGAATGGA
AAGCGGATTA CCTCCGAAAT AACTACTACC GAAAAACCTT TTGCGATTGT GCTTTCTCCT
CATAAAACAC AACTGAAAGC CGGTAAGCAA GATGCCGTAG TGGTGAATGT GAGTGTAGTA
GATAAAAAAG GACGTGAAGT ACCTAATGCC GATGCCCTTA TACAGTTTCA GCTTACAGGA
GATGCTCGCA TTATAGGAGT AGGAAACGGC GACCCCAGTT CGCACGAGAA AGATACTTTT
GCCGAAGGAG AGCGTGTAGA GCGTAAACTC TTTAATGGCA AATGCCAAGT GATTATCCGC
TCAGGTGAAA AAGGTGGAAA GGTACAACTA CGCGCTATAA GTAACGGACT GAAAGAGGCG
GTGGTGAGAA TGAATTAA
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| Protein sequence | MLLWLAHPIY GQAIREHILL DNGWKFSLGH ATDPTKDLFY RVYNDFSKTL SKGINFSSID
YDDSAWQTVD LPHDWAVTLP FSEKGDWSHG YKALGSTFPE HSIGWYRKTF DLSKSEAGKR
IELQFDGIFR DSRCWVNGIY VGHHLSGYTG IKYDITDLVH FGKPNVITVR VDATQNEGWF
YEGAGIYRHV WLNSYNSVHS SPEEVFIYTK SIGKQAEMHA EATVHNRETS SQTFQVEWSI
LNREKKVIAT HKSANTTFAP NEKVTVKSNL NIPNAQLWDT EHPYLYTLTT KIISNGKTTD
LIHTRFGVRT FSYQPDGFYL NGKKMKIKGV CVHQDHAGVG TALLDELQYY RIGLLKAMGA
NAYRTAHHPH SPAVLQACDS LGLLVMDETR LLNSGREYRQ QFEDLIKRDR NHASVFMWCI
GNEEEKIQST ETGERIARTL VSLQQHLDPS RVSTYGANVG NENEGVSAAI PVRGFNYNLY
GLTDYEKTHP NQPIIGTEVA STVGTRGVYL PEIVLDKAGG YSGHFVADTL RAYLLDQDKS
YPSWASQAQQ WYSTTANDPR FMGGFVWTGF DYRGEPTPFA WPNISSHFGV MDVCGFPKNV
YYYYKAHWSE SPILHIAPHW NLNLPQGTVV KVWVYSNTEE VELFLNGKTL GKQKTPAFGH
LYWEVPYEKG TLKAVGTKNG KRITSEITTT EKPFAIVLSP HKTQLKAGKQ DAVVVNVSVV
DKKGREVPNA DALIQFQLTG DARIIGVGNG DPSSHEKDTF AEGERVERKL FNGKCQVIIR
SGEKGGKVQL RAISNGLKEA VVRMN
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