Gene Coch_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1013 
Symbol 
ID8367433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1191245 
End bp1192657 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content42% 
IMG OID644983439 
Producthypothetical protein 
Protein accessionYP_003141129 
Protein GI256819850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAA CCCTACATAA AACACTAAGA AACGCTTTGT TTTTAATGCT TTGCCTAAGC 
AGTCCGCTAT GTTTGGCACA AGCAAATATA ACGGTAAGCA AAACCCACCC GCGCTATTTT
GAAAAAAATG GTGCGACGTG GATTCCTATT AGCACCAATT ATCTACCATC GCATAATTTT
GAAGAGGTAG AAAAGTACTT TAAACACTTT GCCGAAAACG GCGGAAATGC AATGCGCATT
TGGATAAGCA CTGAGTTCTT AGAAATAGAA GACCAAAAAG AAGGCAAGTA CAATCCCGAG
AAGTTAGCGC GTATAGAACA GTTGCTACAA CTCGCCGAAA AGTATCATAT TTACCTTAAA
TTCACCCTGC ATCACCTGCG TACTATCTCT AATAACATCT CACCTGAGGC TTCTTGGTGT
AACAGCTATT CGCTAGCTAC CAAGTTCAAG AATGTAAGCG AGTATGTAAG TACTAAAAAA
GGCAAAAAGT CCTACTTAAA ACGCATCAGA GCTCTTGCTC AAAAGTGCCA AAACCACCCG
TATGTATATG GGTGGGAGTT GTGGAACGAA ATGGATTCAG CTGTACCCGA AGCAGAGTGG
CTACCTTTTA CCGAAGAGAT GCTCGGTAAG GTGAAAAAGT TATGCCCTGA GCAATTGGTT
ACTCAAACCT TAGGCAGTAT GCACGCCTCT TATATGGACG ACTACTACAA GAAGTTGGCA
GTAATACCTG ACAACGAGTT TTTGAGCATT CACCGTTATT TAGACGAGGG CGACAAGTGG
CATCAATACC CGATAGTGAA AGGAGCTGTG AGTGCTTTAG CAACCGATGC CGTAGCTATG
GGCTTGACAT TTACCAAAAA CGACCCCAAG CCTGTTGTCA TCAATGAGAT AGGAGCTGTA
AACCCTAACC ACGCAGGGCC TTCGTCGCTT TATACAAAAG ACACAGAGGG CGTTTTGTTA
CACGATTTTA TCTTTGCACC TTTCTTTGGA GGTAGTGCAG GTTCGGGCAA TACTTGGCAT
TGGGATCATT ACATAGAGCC TAACCAATTG TGGTATCACT TTGGGCGTTT CAAAAACGCT
ATTGAAGGAA TTGACCCCGT GAAAGAAGCG ATGCAACCCT TCTATTTCAA AAGAAATACC
GTAGCCTGTT ACGGACTAAA AGGCAAAACA AAAACGATAT TGTGGTGTAG AGACCTAACT
AACAATTGGA AAACAGAGTT GCGTGAGGGG CGTCCTGCCC AAATGAAACG AGATTTCGAA
ATACCACTCA ACCTCATAAA TATAAAATAT ACTCATTACA GTGTTTACGA CCCTTGGACG
GATAAATGGG AACGACATAT GCCTATGTAT GACGGAAAGG CATTGATTCC AGCCTTCAAG
CGTTCGATAG TAGTGGTATT AGAAAACCCA TAG
 
Protein sequence
MNITLHKTLR NALFLMLCLS SPLCLAQANI TVSKTHPRYF EKNGATWIPI STNYLPSHNF 
EEVEKYFKHF AENGGNAMRI WISTEFLEIE DQKEGKYNPE KLARIEQLLQ LAEKYHIYLK
FTLHHLRTIS NNISPEASWC NSYSLATKFK NVSEYVSTKK GKKSYLKRIR ALAQKCQNHP
YVYGWELWNE MDSAVPEAEW LPFTEEMLGK VKKLCPEQLV TQTLGSMHAS YMDDYYKKLA
VIPDNEFLSI HRYLDEGDKW HQYPIVKGAV SALATDAVAM GLTFTKNDPK PVVINEIGAV
NPNHAGPSSL YTKDTEGVLL HDFIFAPFFG GSAGSGNTWH WDHYIEPNQL WYHFGRFKNA
IEGIDPVKEA MQPFYFKRNT VACYGLKGKT KTILWCRDLT NNWKTELREG RPAQMKRDFE
IPLNLINIKY THYSVYDPWT DKWERHMPMY DGKALIPAFK RSIVVVLENP