| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1011 |
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| Symbol | |
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| ID | 8367431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1185702 |
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| End bp | 1188761 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983437 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_003141127 |
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| Protein GI | 256819848 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00111283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATAC AACATACTCT ATTCTTATTC ATTTTTGCTT TGGCGAGTAG TCTCAGCACA
GCGCAAACCC ACGATTGGGA AAACTTAGCG GTAAGCAGTA TCAACACCGA AAAAAGCCAT
AGCCACTATG AGCCGGCTGG AAAAATACTC CTCAACGGCA ATTGGCAGTT TGCCTACTTC
AAGCACCCTT CACAAGTGCC TGCTGATTTC TTTTTGGGCA AAGGCATTAC CCAATGGGAC
GCTATAAAAG TGCCTTCAAA TTGGCAACTG CAAAGCAACC GATATGACCC TCCTGTGTTT
ACCAATATCA AATATCCGTT TGAGATGAAC CCTCCTTATA CCCCTAAGGA CTACAACCCT
ACGGGAGTGT ATAGAACGCA GTTCACGGTG CCTAGCAAGT GGAAAGGCGA ACAGGTGTTC
ATTCACTTTG CGGGAGTGCA ATCGGCGATG GAGTTGTTCA TCAATGGTAA GCAAGTGGGC
TATCACGAAG ATGCAATGTT ACCTGCCGAG TTCAACATCA CTCCTTACCT CAAAAAAGGC
AAAAACGAAC TATATGTAAA AGTCTTGAAC TGGTCGGACG GCAGTTATAT AGAAGACCAA
GATTTTTGGC GACTCAGCGG TATCTATCGC GATGTATACC TCTTTGCTAC CCCCGAGTTG
CGTATGCGTG ACTTTTCAGT ATATCCTCAG CTCGATGCGC AATACCGCGA TGCTACCTTG
CAGGTGCAAG TAGAGGTACA GAATTTAGGC GAAAAAGTAA GTGATGCTCT TGTGGTACAA
ACCTCTCTTA AAGACAGCAA AGGTAATGTG ATAGGCACTG AAAAAGCCTC TATTGCGGAT
ATTGCTGCGG GAAAAGAAGC TACCGTTAGT GCCCAAATAG CTGTAAAAAA TCCGTTGAAA
TGGACTGCCG AAACCCCTAA CCTTTACAAA GTGGAACTCA GTTTGCTCAC CGCCAAAGGC
AAGGTGTTAC AATCGTTTAC TCAAAATGTA GGATTTAGGA AGATTGAACT AAGCAACGGA
TTGCTCCTTG TGAACGGCAA GCCTGTGAAG TTTAAAGGAG TGAACCGTCA CGAGTTCGAC
CCTTATAACG GTCGCACCAT CACCCGCCAA TCGATGATTG ACGATATTAT CCTGATGAAA
ACGCACAACA TCAATGCGGT GCGCACCTCT CACTACCCCA ATCAGCCTGA GTGGTATACC
CTCTGCGACG AATATGGATT ATATGTGGTA GACGAAGCTA ATATCGAGAG CCACGGATTG
TGGGAGAGTG GCTACTACAT AGGCGAACGC CCTGAATGGC AAAAGGACAT CGTGGAGCGC
AATGTGAATA TGGTTGCTCG CGACAAGAAC CACCCTTGTA TCATCTATTG GTCGATGGGG
AATGAATCGG GTTGGGGTAA GAACTTTGAT GCAGCTTACG AGGCGATAAA AGCCCTCGAC
CCTCAAAAGC GCCCCGTGCA CTACGAGTCT AAAAACCCTG CTTATGCAGG CGTGCTCTCG
CATTACGATA TCATCTCTAA TATGTACACC GAGCTCAACC ACCTGAACAA TCTCTTTACC
GAAGACCCCA AACGCCCTGT GATTATCTGC GAATACGCCC ATTCTATGGG TAACAGCTTA
GGCAACTTCC GCAAGTATTG GGAGCTTTTT GCTACCAATG AGCGCTACCA AGGTGGTTTT
ACGTGGGACT GGAAAGATCA AGCGTTGCGT TGCAAAGATA AGAACGGCAA AGAGTATTGG
AACATCATCA ATCATATCGA CAAGGCGAAT GTGAACGACG GATTGGTAAA TGCCACAGGC
GTTCCTCAAC CCGAAATGCA CGAACTGAAA AAGGTATATC AGTATTTCAA TGTAAAGGAT
ATTGATATCA AGACAGGCTT GGTACTCATC AGCAATAGCA ACTACTTTGT AAATAGCGAC
GAGGTGTATT TGCAATGGGA ACTTATTGAG AATGGCAAGC CTATCGCCAA TGGGGTAATC
AACGACCTGA ACATCGCCCC ACAAAGCCAA AGAGCCCTAC AAATACCTTT CAAAACAAAA
TTAGTACAAA ACGGCAAGGA ATACTTTATG AACTTCCATT TTAAGAATAA AAAGGCTACT
GCTTGGGCTT CAAAAGATTT TGAAGTAGCC AAAGAACAAC TCGCTTTCCC TAACCGTGTT
GAGAGAGAAT TCACCAAGCC CTCCGATAAA AAACTAACAT TTACTGACGA AGCTACAAAC
TTCACCGTAA AAGGCGATAA TTTTACAGCC GTATTCAGCA AAAAAACAGG CGGTTTAAGT
CAATTTACAC ATAAAGGGAA AAACCTGCTT TCAGAAGCGA TGGTGCCCTC TTTTTGGCGT
GTACCTACCG ATAACGATGA AGGTGGTTTT GAACAATCAT ATGCCTCAGC TTGGCGCAAA
GCGGGATTAA AAGAAGCTAT GGTAACAGCT ACCGAAATGA AAGCTACGCA AATAGGGGAA
ACCCAACTGA AAATAGTAGC ACACAACCGC ATTGAAACCA AAGCGGGCAA TATCAGCCAA
CAAGTAACTT ACCTCATCAA TGGAGACGGA CGTATAGATA TCAGCACAAA TGTGGAAGTG
CCTGCTTCTG TGCCTGCTTT GGCAAGAGTG GGAATGCTCC TAACACTCGA CAAGAGTTTT
AACAAAGTAG AATGGTACGG CAAAGGTCCT TATGAAACTT ATGCCGATAG AAAAGAATCA
GCTTTTGTGG GTATTCACAG CGGTGCAGTA AAGGATATGC ACTTTCCTTA TGTGATGCCT
TCTGAAAACG GCAACCATAT CGATACCCGT TGGCTCAAAC TCCTTTCGGG TACTACTGAA
CTATATATCA GTGCTCCTAA ACTCTTTAAT TTCAACGTGC AAGACTATTC AGACGACGCG
CTGAACCAAT CCAAAGAAAC CCAAGAACTG CGCCGTGGAG ACCACACTTA TTTGCACATC
GATGAGGCTC AAATGGGTGT AGGAGGAGAC GACAGCTGGT CGCCACGCGT ACATAAAGAG
TTTTTGCTCA ACCAACCGTA TTATCATTAC GAATTTAGCA TTCAGGTAGG GGGGAAATGA
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| Protein sequence | MRIQHTLFLF IFALASSLST AQTHDWENLA VSSINTEKSH SHYEPAGKIL LNGNWQFAYF
KHPSQVPADF FLGKGITQWD AIKVPSNWQL QSNRYDPPVF TNIKYPFEMN PPYTPKDYNP
TGVYRTQFTV PSKWKGEQVF IHFAGVQSAM ELFINGKQVG YHEDAMLPAE FNITPYLKKG
KNELYVKVLN WSDGSYIEDQ DFWRLSGIYR DVYLFATPEL RMRDFSVYPQ LDAQYRDATL
QVQVEVQNLG EKVSDALVVQ TSLKDSKGNV IGTEKASIAD IAAGKEATVS AQIAVKNPLK
WTAETPNLYK VELSLLTAKG KVLQSFTQNV GFRKIELSNG LLLVNGKPVK FKGVNRHEFD
PYNGRTITRQ SMIDDIILMK THNINAVRTS HYPNQPEWYT LCDEYGLYVV DEANIESHGL
WESGYYIGER PEWQKDIVER NVNMVARDKN HPCIIYWSMG NESGWGKNFD AAYEAIKALD
PQKRPVHYES KNPAYAGVLS HYDIISNMYT ELNHLNNLFT EDPKRPVIIC EYAHSMGNSL
GNFRKYWELF ATNERYQGGF TWDWKDQALR CKDKNGKEYW NIINHIDKAN VNDGLVNATG
VPQPEMHELK KVYQYFNVKD IDIKTGLVLI SNSNYFVNSD EVYLQWELIE NGKPIANGVI
NDLNIAPQSQ RALQIPFKTK LVQNGKEYFM NFHFKNKKAT AWASKDFEVA KEQLAFPNRV
EREFTKPSDK KLTFTDEATN FTVKGDNFTA VFSKKTGGLS QFTHKGKNLL SEAMVPSFWR
VPTDNDEGGF EQSYASAWRK AGLKEAMVTA TEMKATQIGE TQLKIVAHNR IETKAGNISQ
QVTYLINGDG RIDISTNVEV PASVPALARV GMLLTLDKSF NKVEWYGKGP YETYADRKES
AFVGIHSGAV KDMHFPYVMP SENGNHIDTR WLKLLSGTTE LYISAPKLFN FNVQDYSDDA
LNQSKETQEL RRGDHTYLHI DEAQMGVGGD DSWSPRVHKE FLLNQPYYHY EFSIQVGGK
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