Gene Coch_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1008 
Symbol 
ID8367428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1178303 
End bp1178635 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content39% 
IMG OID644983434 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003141124 
Protein GI256819845 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTG TATTACCCGA TAAACTGTAT TACACCATAG GAGAAATAGC CAAGGCATTC 
AATGTGAACG CTTCTCTTAT TCGCTTTTGG GAAAAGGAAT TTTCTATTAT CAGCCCGAGA
AAGACGAGCT CGGGAAGCAG GAAATTCTCT CCCGATGATG TTAAGAAACT CCAGCTTATC
TATCATTTGG TAAAAGAACA AGGCTACACC CTTGAAGGAG CGCGTCAACG TCTTAAAGAA
GACAAGCAGA AACCTCTTAC AAACCTTGAT GTGGTTACAA AGTTAGAGCG TGTAAAGCAA
ATGCTTATCG ATATCAAAGA AAATCTTGAA TAA
 
Protein sequence
MDIVLPDKLY YTIGEIAKAF NVNASLIRFW EKEFSIISPR KTSSGSRKFS PDDVKKLQLI 
YHLVKEQGYT LEGARQRLKE DKQKPLTNLD VVTKLERVKQ MLIDIKENLE