Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1006 |
Symbol | |
ID | 8367426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1176497 |
End bp | 1177471 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644983432 |
Product | Peptidase M23 |
Protein accession | YP_003141122 |
Protein GI | 256819843 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGG TAAAATATTA TTACGACCCC GATACGCTCT CGTATAAACG CATCCTCTCC CGAAAGCGTA CAAAAGTGCG CAATGCTTTA ATTTTTCTTA CAGCTGCTGC ACTCTTCGGG ATTTTATTCT CTTTTATAAT GATTAACTCG CGCTTGTTTT TCACCCCCCG CGAGGTGGTA TTAGCACGCG AGATTAAAAC CTATGAAACC AACTACCAAA TCCTGAACAA AAAGATGGAA TTGGCGGAAG ATGTGCTTGC CGACCTTGAA GAACGCGATA ATAATATGTA CCGCCTTTAC TTCAATGCTC CTATTATCCC CGATAGTGTT CGCAAAAGCC TCAAAGACCC TAACCGCTAT AAAAACCTCG AAAAATACGG AAACTCCAAA CTTGTTGCCA ATACAAACAA ACGCTTAGAT ATATTGCGAA AACAGTTGGT CGTACAGTCG AAATCGTTAG ATGAGATTGC TAAACTTTCT AAGGCAAAGG AAAAATTCTT GTCTTCTATT CCTGCCATTC AGCCTATTAA TAATAAAGAT TTAAAGCATA TGGCATCGGG ATATGGTTGG CGTATCGACC CTTTTACCAA AGCGCGTAAG TTCCATTATG GTATGGACTT CACTGCGCCC CAAGGCACTC CTGTATATGC TGCGGGCGAT GGTGTAGTAG CACGTGCCGA TAGCAATGCC TCAGGTTATG GTAACCACAT TCGCATCGAC CACGGTTATG GCTATGTAAC TCTCTACGGA CACCTTTCGG CTTACAACGT GCGTGCAGGG CAACACGTCA AGCGTGGCGA CCTCATAGGA AGGGTAGGAA GTACCGGTCG CTCGGAAGCT CCACACCTGC ACTACGAAGT GATAAAAAAC GGCGAACACA TCAACCCGAT ACACTTCTAT TATGGCAATC TCACCCCGAG CGAATACACC GAGATGTTAC ACGTTTCTAC CCAAGAAAAT CAATCGCTTG ACTAA
|
Protein sequence | MKKVKYYYDP DTLSYKRILS RKRTKVRNAL IFLTAAALFG ILFSFIMINS RLFFTPREVV LAREIKTYET NYQILNKKME LAEDVLADLE ERDNNMYRLY FNAPIIPDSV RKSLKDPNRY KNLEKYGNSK LVANTNKRLD ILRKQLVVQS KSLDEIAKLS KAKEKFLSSI PAIQPINNKD LKHMASGYGW RIDPFTKARK FHYGMDFTAP QGTPVYAAGD GVVARADSNA SGYGNHIRID HGYGYVTLYG HLSAYNVRAG QHVKRGDLIG RVGSTGRSEA PHLHYEVIKN GEHINPIHFY YGNLTPSEYT EMLHVSTQEN QSLD
|
| |