| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1004 |
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| Symbol | |
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| ID | 8367424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1175082 |
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| End bp | 1175942 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644983430 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003141120 |
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| Protein GI | 256819841 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG TGTATTTTAT AACAGGAGCA AGCAGTGGTT TAGGTAAAGC AATTGCTTTG
CAAACTTTGA AAGAAGGCAA TGTAGCAGTA CTTGCTGTTC GCAATCCAGA AAAAGTAACT
GATTTAGTAA ATACTTTTAG AGAAAACACA TTGGTTGTCT CATTAGAAAT TACTAATGAA
AAAGAAAGAC AAGAGGCAAT ACAAACAGCT ATAGCTAAAT TTAGTAGAAT AGATGTGTTA
GTAAATTGTG CAGGAAGAGG CGATTTAGGA GCTTTGGAAG AATTTTCAAG TCAGCAAATA
CGTGCTCAAA TGGAAATCAA TTTCTTTGCA ACTATTGAGC TTACTCGTTT GGTATTACCT
ATAATGCGCC GACAAAAAAG TGGTAATATT GTAAATGTAT CAAGTATTGG AGGACGCGTA
AATATTGGTG GATTTTCACT TTATGGAGCT GCAAAATATG CTTTAGAGGG CTTTTCTGAA
GCACTTTACC ACGAAGTAAA ACCTTTAGGT ATCAGAGTAA CAATAGTAGA ACCAGGAGCT
CTTAGGACTC ATTTTGCTGG AGCAGGTAAT TTACGCCCTG AAAATCATAT TGTTGATTAT
GACGATACTA TTGTACCTCT GCGCAATTAT CTTTACGGAA GTGATGGAAA ACAACAAGGA
GATCCAGAGA AAGCAGCAAA GGTTATTATC AAAGCTATCA ATGATAAGGA ACCTCCTTTG
AGACTCGTAT TAGGAAAAGA TGCTTATGAC CTTTTGGAAG CTAAAAGAAC AGAAGAAAAG
GAAGAACTTA ATAAATGGCG TCCTTTAGGT GAAGCTATAG CTTTTGATGA TGCTGAGTTT
GTTGCTATTG GTAAAAATTA A
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| Protein sequence | MKKVYFITGA SSGLGKAIAL QTLKEGNVAV LAVRNPEKVT DLVNTFRENT LVVSLEITNE
KERQEAIQTA IAKFSRIDVL VNCAGRGDLG ALEEFSSQQI RAQMEINFFA TIELTRLVLP
IMRRQKSGNI VNVSSIGGRV NIGGFSLYGA AKYALEGFSE ALYHEVKPLG IRVTIVEPGA
LRTHFAGAGN LRPENHIVDY DDTIVPLRNY LYGSDGKQQG DPEKAAKVII KAINDKEPPL
RLVLGKDAYD LLEAKRTEEK EELNKWRPLG EAIAFDDAEF VAIGKN
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