Gene Coch_0991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0991 
Symbol 
ID8367410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1160555 
End bp1161832 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content44% 
IMG OID644983416 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_003141107 
Protein GI256819828 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAAA CAACTATCAT CAGTATTATT CCTCTGCTCG TATTCGTAGC ATTATTTTTA 
GGTAGTGGGT TGTATTTCGA CAACTTCTAC TCGCTACCTG CTCCTATTAT TGCACTTTTT
TCGGTGGTAG TGGCTTTGCT TATCTACCGA GCTCCTATGA AAGAGAAAAT AGGATTGTTC
TTTAAAGGGG CGGGTGATAG CAATGTGCTA CAAATGTGTA TGATTGCACT TTTGGCTGGG
GCATTTGCTT CGGTGGCTAA TGCTTTGGGA AGTACGCATA GTATTGTGAA TATGGGTATG
TATTACATAT CGCCAGAGTA TTTCCCGGTA GGGATTTTTA TCATTGCGTC GTTTCTTTCA
TTTGCTACGG GCACTTCGGT GGGTACTATT ATGACGCTTT CGCCGATAGT GTTTGACCTT
GCCACCCAAA GCCAGTCGAA CACGGCACTC ATAGGCGCAT CACTGCTATC GGGGGCGATG
TTTGGCGATA ACCTATCTCT TATTTCGGAT ACGACGATTG CCGCCACGCA GTCGGTTGGA
TGTCAGATGA ACGAAAAGAT GAAGGCGAAT GCTAAAATTG CGATACCAAT GGCGATTTTA
ACGGTTATCA TACTGCTGTT GATAGGAAAT CCTGACGCCG AAAATCACCT TCACAATCAG
TTGTATAGCG ATTTTAACGC TGTGCTTATT TTGCCTTATG TGGCGGTGGT GGTAATTGCG
CTTTTTGGGG TAAACGTATT TGTGTCGCTT TTCTTAGGTA TTCTTATCTC GGGGATGATA
GGGTTTGCGT ACGGCAAGTT TCATTTCTTG CAGTTTGCTA CTGATATTCA CAAAGGTTTT
ATGGGAATGG CTGATACCTT CTTCTTATAC TTTATCATAG GAGGCTTGGC GTTTTTGGTA
GAGCATTTTG GCGGGATTCG GTTTTTGATG AACCTCATTA CTCAGCGCAT CAAGAGTGGC
TCGTCGGCTC TTTTAGGGAT GGGCTTTTTG GTGACAGTAG CCGATGTGTG CGTGGCGAAT
AACACGGTGG CTATTCTCAT CGCTTCGAAA ACGAGCAAAA CGATTGCTGA ACAGTTTAAA
ATACCGTTGC GCAGTGTGGC ATCGGTATTG GATATCTTCT CTTGTTATGC GCAGGGGCTT
ATCCCGTATG GAGCGCAGGT AATTGCCCTA TACAAATTTG CCGACACGAT AGATTACCCC
CAGCTGGTGA TGTATGCTAT TTACTTACAT TTACTGCTGA TAGGCACTTT GGGGTATATT
TATGTGGGTA AAAAGTAA
 
Protein sequence
MQKTTIISII PLLVFVALFL GSGLYFDNFY SLPAPIIALF SVVVALLIYR APMKEKIGLF 
FKGAGDSNVL QMCMIALLAG AFASVANALG STHSIVNMGM YYISPEYFPV GIFIIASFLS
FATGTSVGTI MTLSPIVFDL ATQSQSNTAL IGASLLSGAM FGDNLSLISD TTIAATQSVG
CQMNEKMKAN AKIAIPMAIL TVIILLLIGN PDAENHLHNQ LYSDFNAVLI LPYVAVVVIA
LFGVNVFVSL FLGILISGMI GFAYGKFHFL QFATDIHKGF MGMADTFFLY FIIGGLAFLV
EHFGGIRFLM NLITQRIKSG SSALLGMGFL VTVADVCVAN NTVAILIASK TSKTIAEQFK
IPLRSVASVL DIFSCYAQGL IPYGAQVIAL YKFADTIDYP QLVMYAIYLH LLLIGTLGYI
YVGKK