| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0970 |
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| Symbol | |
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| ID | 8367389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1136240 |
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| End bp | 1138447 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644983395 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_003141086 |
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| Protein GI | 256819807 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA TTATCTATAC CATTACCGAT GAGTCGCCCT ATTTGGCTAC CCATTCGCTA
TTGCCAATCA TCAAACGCTT TTGCGCTTCT TCAGGAATCA ACTTTGAAGC CAAAGACATC
TCATTGGCAG GGCGTATTTT AGCCACTTTC CCCGATTTTC TCACAGCAGA ACAACGGGTG
CCCGATGCGC TTAGTGAATT GGGGGCGTTG GCAACGTGTC CGGAAGCTAA TATCATCAAG
TTGCCTAATA TCAGTGCTTC GGTACCCCAA CTAAAAGCGG CTATCGCCGA ACTGCAATCG
CAAGGCTATG CCCTCTCCGA TTATCCTGAA AATCCTACAA ATGAAGCCGA AACAGCTATC
AAACAGCGGT ATGACAAGGT GAAAGGCAGT GCGGTGAATC CTGTACTGCG CGAGGGTAAT
TCCGATAGGC GCGCGCCTAA ATCGGTAAAA CAATACGCTC AAACGCACCC CCATTCAATG
GGCGCGTGGA GTGCTGAGAG TCTCACGGAA GTCGCCACGA TGCAAGCGGG CGATTTCTAC
CACAACGAGC AATCGGTAAC ACTTCAAAAG GCCGATGTGG TGCGCATAGA GTTGGTAAGC
CCTAAACACG AGGTGCAAGT GCTCAAAGCG GAACTTCCTT TGCAAGCGGG TGAAGTGATA
GATGCTACTT TTATGAGCAA AGAGGCGCTT TGTAAATTCT ATAAAAAAAC CTTTGCCGAA
GCGAAAGACA AGGGCGTACT CCTCTCTTTG CACCTGAAAG CTACAATGAT GAAGGTTTCT
GATCCTATTC TCTTTGGCTA TGCGGTTGAA ACATACTTTG CTAATTTGTT CCAAAAACAC
CCGCGCGAAC TGAAAGCCTT AGGGGTGAAT GCACGTAACG GTCTTTCGGA TATTCTGGCG
AAAATAGAAC AATTGCCTGC TGAAGAACAA GAACCCTTAA AACACGACAT CGAGGGAGCA
CTTACACGAG CAGCAGCCTT GGCAATGGTA AATTCCGATA GGGGGATTAC CAACTTGCAT
TTCCCTAACG ATGTGATTGT AGATGCTTCT ATGCCAGCAA TGATTCGCAA TGGGGGCAAG
ATGTGGAATG CTAAAGGCGA GGCTCAAGAT ACTTTGGCGG TACTGCCTGA TAGTACTTAT
GCGCGTATCT ACCAAGTGGT GATTGACTTC TGTAAGAAAC ACGGGGCGTT TAATCCTGCT
ACGATGGGAA GCGTTGCTAA TGTGGGCTTA ATGGCGCAAA AAGCTGAGGA ATACGGCTCG
CACGACAAGA CTTTCGAAAT CCCTCATAGC GGACGTGTAC AGGTGGTAGG CACCGATGGT
AAAGTGTACT TATCGCACAA GGTAGAAAAA GGCGATATTT GGCGTATGTG TACTGCGAAA
GATGCTGCGA TACAAGATTG GGTAAAATTA GCGGTAACAC GTGCACGCCT CAGCAAAACG
CCAGCGGTCT TTTGGTTGGA CGAGCACCGC GCTCACGATG CGCAACTCAT CAAAAAAGTA
AAACACTATT TGGCAACACG CGATACCGAG GGGGTAGATA TCCGTATAAT GTCGCCCGAA
ACGGCGATGC TCTTTACCTT AGAGCGCACT CGCAAGGGCA AAGACACCAT TTCAGTAACG
GGCAATGTGT TGCGCGATTA CCTCACCGAC TTGTTCCCTA TCTTGGAATT GGGTACTAGT
GCCAAAGTGC TCTCTATCGT CCCTTTGATG AACGGTGGCG GACTCTTTGA AACGGGTGCA
GGGGGCTCGG CGCCTAAATT AACCGAACAG TTTCTTGCCG AAAATCATCT TCAATGGGAT
TCCTTAGGAG AATTTCTCGC CTTAGGAGCT TCGTTAGAGC ATTTTGCGCA AAAACACGAG
AACCCCAAAG CCTTAATCTT AGCCCAAACC CTCGATGAGG CAACGAGTAA GCTGTTGAAC
AACGATAAAT CGCCACAAGT CAAAGTAGGC ACGCTCGACA ATCGCGGAAG TCACTTCTAT
TTGGCACTCT ACTGGGCAGA AGCCTTAGTG GCACAAACTC AAGACAGCGC ACTTGCCAAA
GAGTTTGCTC CTATCGCCAA AGCCCTAAAA GACAACGAAG AGACTATCGT GGAAGAACTC
ACCCGTATAC AAGGTATGCC GGTAGAGTTA GGAGGTTATT ACCATCCTGA TTTCACCAAA
GTAGCAACAG TAATGCAAGG AAGTAAAACA CTAAAAAAGA TATTATGA
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| Protein sequence | MKNIIYTITD ESPYLATHSL LPIIKRFCAS SGINFEAKDI SLAGRILATF PDFLTAEQRV
PDALSELGAL ATCPEANIIK LPNISASVPQ LKAAIAELQS QGYALSDYPE NPTNEAETAI
KQRYDKVKGS AVNPVLREGN SDRRAPKSVK QYAQTHPHSM GAWSAESLTE VATMQAGDFY
HNEQSVTLQK ADVVRIELVS PKHEVQVLKA ELPLQAGEVI DATFMSKEAL CKFYKKTFAE
AKDKGVLLSL HLKATMMKVS DPILFGYAVE TYFANLFQKH PRELKALGVN ARNGLSDILA
KIEQLPAEEQ EPLKHDIEGA LTRAAALAMV NSDRGITNLH FPNDVIVDAS MPAMIRNGGK
MWNAKGEAQD TLAVLPDSTY ARIYQVVIDF CKKHGAFNPA TMGSVANVGL MAQKAEEYGS
HDKTFEIPHS GRVQVVGTDG KVYLSHKVEK GDIWRMCTAK DAAIQDWVKL AVTRARLSKT
PAVFWLDEHR AHDAQLIKKV KHYLATRDTE GVDIRIMSPE TAMLFTLERT RKGKDTISVT
GNVLRDYLTD LFPILELGTS AKVLSIVPLM NGGGLFETGA GGSAPKLTEQ FLAENHLQWD
SLGEFLALGA SLEHFAQKHE NPKALILAQT LDEATSKLLN NDKSPQVKVG TLDNRGSHFY
LALYWAEALV AQTQDSALAK EFAPIAKALK DNEETIVEEL TRIQGMPVEL GGYYHPDFTK
VATVMQGSKT LKKIL
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