Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0969 |
Symbol | |
ID | 8367388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1134954 |
End bp | 1136237 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644983394 |
Product | citrate synthase I |
Protein accession | YP_003141085 |
Protein GI | 256819806 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACA CAGCAAAACT GATTTTTGAA GGGAAAGAAT ACGAATTTCC TATCGTAGTA GGCACCGAAA ACGAAAAAGC GATTAATATC GAAAAATTGC GTGCCTTAAC GGGTTTGGTA ACCTTGGATT CGGGTTACAA AAACACGGGT TCTTGCAAGA GTGCCATTAC CTTCCTCGAC GGCGAACGGG GCATCTTGCG CTATCGTGGC TATAACATCG AAGATTTAGC TGCTAAAGCC GAGTTCCTCG AAGTAGCCTA TCTTCTTATT TTCGGAGAAC TCCCCACTGC CGAAGAGTAT GACGATTTCA AAAAAACAAT TCACAAGTAT ACCCTTGTTC ACGAGGATAT GCGCCATATT ATGGACGGTT TCCCGCGCTC GGCTCACCCT ATGGGGGTAT TAGCATCAGC TACCAGTGCG CTCACCGCTT TCAATCCGGT ACCAGTAAAT GTACATTGTC CTAAAAACGT GTATCAAGCG GTCTGTAAAG CCATTGCTAA AGTAACCATC ATCGCTTCTT GGGTATACCG CAAACGCGAG GGCTTACCGC TGAATTATTA CGACAATAGC AAGGGCTATA TCGAGAACAT TTTGCGACTC TTCTTCGAAA TCCCTACTGA GGAATATAAA ATCAACCCTA CGGTAGTGAG TGCTCTCAAC AAACTGCTCA TCCTTCACGG CGACCACGAA CAGAACTGCT CTACTTCTAC GGTGCGTTTG GTGGGGTCTT CCGAGGCGGG TCTGTTTGCG AGTATTTCCT CTGGAGTTTC AGCCCTTTGG GGTCGTCTCC ACGGCGGGGC AAACCAAGCG GTGATTGAAA TGCTTGAAGA AATTCATAAA GACGGAGGCG ATGTCGATAA GTTCATTAAT AAAGCAAAAG ACAAAAATGA CCCTTTCCGT TTGATGGGCT TTGGGCACCG TGTGTACAAA AACTTCGATC CACGGGCTAA AATCATCAAA GTGGCTGCCG ATGATGTGCT CAATGCTTTG GGTATAGAAG ATCCAATTTT TAGCATTGCC AAACATCTTG AAAAAGTAGC TTTGGAAGAC GACTACTTCA AATCGCGTAA TCTCTACCCT AATGTAGATT TCTATTCGGG TATCATCTAC AAAGCCTTAG GTATGCACTT AGAGATGTTC ACTGTGCTCT TTGCTATCGG TCGTCTCCCT GGTTGGATTG CCCAATGGAA GGAAATGCGC CAAGGAGGAG AACCTATCGG TCGTCCACGA CAAATATACG TAGGTGCCAC CGAAAGAGCT TTTGTTGAAT TGAATAAACG ATAA
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Protein sequence | MENTAKLIFE GKEYEFPIVV GTENEKAINI EKLRALTGLV TLDSGYKNTG SCKSAITFLD GERGILRYRG YNIEDLAAKA EFLEVAYLLI FGELPTAEEY DDFKKTIHKY TLVHEDMRHI MDGFPRSAHP MGVLASATSA LTAFNPVPVN VHCPKNVYQA VCKAIAKVTI IASWVYRKRE GLPLNYYDNS KGYIENILRL FFEIPTEEYK INPTVVSALN KLLILHGDHE QNCSTSTVRL VGSSEAGLFA SISSGVSALW GRLHGGANQA VIEMLEEIHK DGGDVDKFIN KAKDKNDPFR LMGFGHRVYK NFDPRAKIIK VAADDVLNAL GIEDPIFSIA KHLEKVALED DYFKSRNLYP NVDFYSGIIY KALGMHLEMF TVLFAIGRLP GWIAQWKEMR QGGEPIGRPR QIYVGATERA FVELNKR
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