Gene Coch_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0963 
Symbol 
ID8367382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1125339 
End bp1126718 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content29% 
IMG OID644983388 
Producthypothetical protein 
Protein accessionYP_003141079 
Protein GI256819800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.867032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAACA AGTTGCTAAA AAATTGGATA TTCTTACTTT CCTTACTAGT TATTGTCTTA 
GCCTTTTTTC TTTCATATAT TTTCCCAGAT TTATGGATAA GGGAGGGGTT TAGTAATGGC
TTTTTTAAAG GAGGTTTCTA TTTCTGTGGT TTTTTTTCTG CTTTATGGTT GTTACAAAAT
CACTTGATTC TTTTTAGAAA AGAAGAATGT TTACGTTCAC TTATAATATG TGTAGGAGCC
GCAACCGTTT TTTTGTGGAC ATATAAGCAT AAAATCACAT TTCGTATGGA TCTACTCTTA
CTTTTTTTAT GTGGTTTTTA TTCTTTAGTT TACCGAAAAT GGATAATGCC TGATAGAGTG
ATGATTGTTT TCTTTTTGCT GATAATATTG CGGTTTTTAG GAATACTATG GGCAGAAGAC
AAAGCCTTTG CTTGGCAAGA TGTTAATACA GATAAACTCT ATTTTTTATT ACTTGTTCTT
ATTACTTGCA TTGGTTTTCG GATAAAAGAA CAAGAGAGTA TGAGTTTTAT TACTCTATGT
TTTAAGTTGT TTTTACTATT ACTTACTTTG AATATAAGTG CTTATATTTT TATACAAAAA
GCTATAAATC TTTATTTTTT TAGTTTTTTG GCTTTTAATA AAGGTTATAT GAATTATTAT
GAGCTCTTAT TAGGATGGTC TATTTTTAAG CATCCTAGTT TTATAGCTTG GATAATGCTT
GTAATATGGG GATTAGGAGT TTTGGTGTGG AGGAAGAATA AAGAACTTAT ATCATTACCA
GAAGTTATTT TGTATGGAGT TCTCTTGTTT TGTTTTGTTT TTATGCTACA AGCGAGAGTA
GCTATAATAG GTTTCCCTTT ATGTCTTTTG ATATTAGGCT GGTTTTATAT TTCTAAAGAA
TGGACTATTC GAAAGCGTAT TATAACTGAA ATAGGACTGT TTTCAATGGG CTTATTAGGT
ATTTATTGGT TAGTTACTCA TACGACCTTT TTTGCTGATT CTGCGCGAGA GAAAATGCTT
ATAAAAGCAA AAGAAAGTAT TAATCATCAT TTTATAATAG GGGCAGGCAC CTCCTATGAA
AAACTTCTAG CAAACGAAAC GATAGGATTA GTACACATTC ACAATGATTT TTTAGCCACA
TTTATTGATT TAGGAATGGT TGGGTTTTCT TTGCTTTTAT TATGGATATT CACTATTTAC
CAAAAAGGGA TTTACAATAG GGATAATTAT ATTATATATT GCCTTATGAC CTTTCTTTTA
TTTATGAATA CGGATGTTGT TTTAAATTAT CAACCAGGGG TGCTTATTTT ACTTCCTTTT
TTAATATTTG TTTTTTTTAA ACAGGAGAAA ACACTTAATT TATACTATAA TAAGGGTTGA
 
Protein sequence
MINKLLKNWI FLLSLLVIVL AFFLSYIFPD LWIREGFSNG FFKGGFYFCG FFSALWLLQN 
HLILFRKEEC LRSLIICVGA ATVFLWTYKH KITFRMDLLL LFLCGFYSLV YRKWIMPDRV
MIVFFLLIIL RFLGILWAED KAFAWQDVNT DKLYFLLLVL ITCIGFRIKE QESMSFITLC
FKLFLLLLTL NISAYIFIQK AINLYFFSFL AFNKGYMNYY ELLLGWSIFK HPSFIAWIML
VIWGLGVLVW RKNKELISLP EVILYGVLLF CFVFMLQARV AIIGFPLCLL ILGWFYISKE
WTIRKRIITE IGLFSMGLLG IYWLVTHTTF FADSAREKML IKAKESINHH FIIGAGTSYE
KLLANETIGL VHIHNDFLAT FIDLGMVGFS LLLLWIFTIY QKGIYNRDNY IIYCLMTFLL
FMNTDVVLNY QPGVLILLPF LIFVFFKQEK TLNLYYNKG