Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0963 |
Symbol | |
ID | 8367382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1125339 |
End bp | 1126718 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 644983388 |
Product | hypothetical protein |
Protein accession | YP_003141079 |
Protein GI | 256819800 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.867032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAACA AGTTGCTAAA AAATTGGATA TTCTTACTTT CCTTACTAGT TATTGTCTTA GCCTTTTTTC TTTCATATAT TTTCCCAGAT TTATGGATAA GGGAGGGGTT TAGTAATGGC TTTTTTAAAG GAGGTTTCTA TTTCTGTGGT TTTTTTTCTG CTTTATGGTT GTTACAAAAT CACTTGATTC TTTTTAGAAA AGAAGAATGT TTACGTTCAC TTATAATATG TGTAGGAGCC GCAACCGTTT TTTTGTGGAC ATATAAGCAT AAAATCACAT TTCGTATGGA TCTACTCTTA CTTTTTTTAT GTGGTTTTTA TTCTTTAGTT TACCGAAAAT GGATAATGCC TGATAGAGTG ATGATTGTTT TCTTTTTGCT GATAATATTG CGGTTTTTAG GAATACTATG GGCAGAAGAC AAAGCCTTTG CTTGGCAAGA TGTTAATACA GATAAACTCT ATTTTTTATT ACTTGTTCTT ATTACTTGCA TTGGTTTTCG GATAAAAGAA CAAGAGAGTA TGAGTTTTAT TACTCTATGT TTTAAGTTGT TTTTACTATT ACTTACTTTG AATATAAGTG CTTATATTTT TATACAAAAA GCTATAAATC TTTATTTTTT TAGTTTTTTG GCTTTTAATA AAGGTTATAT GAATTATTAT GAGCTCTTAT TAGGATGGTC TATTTTTAAG CATCCTAGTT TTATAGCTTG GATAATGCTT GTAATATGGG GATTAGGAGT TTTGGTGTGG AGGAAGAATA AAGAACTTAT ATCATTACCA GAAGTTATTT TGTATGGAGT TCTCTTGTTT TGTTTTGTTT TTATGCTACA AGCGAGAGTA GCTATAATAG GTTTCCCTTT ATGTCTTTTG ATATTAGGCT GGTTTTATAT TTCTAAAGAA TGGACTATTC GAAAGCGTAT TATAACTGAA ATAGGACTGT TTTCAATGGG CTTATTAGGT ATTTATTGGT TAGTTACTCA TACGACCTTT TTTGCTGATT CTGCGCGAGA GAAAATGCTT ATAAAAGCAA AAGAAAGTAT TAATCATCAT TTTATAATAG GGGCAGGCAC CTCCTATGAA AAACTTCTAG CAAACGAAAC GATAGGATTA GTACACATTC ACAATGATTT TTTAGCCACA TTTATTGATT TAGGAATGGT TGGGTTTTCT TTGCTTTTAT TATGGATATT CACTATTTAC CAAAAAGGGA TTTACAATAG GGATAATTAT ATTATATATT GCCTTATGAC CTTTCTTTTA TTTATGAATA CGGATGTTGT TTTAAATTAT CAACCAGGGG TGCTTATTTT ACTTCCTTTT TTAATATTTG TTTTTTTTAA ACAGGAGAAA ACACTTAATT TATACTATAA TAAGGGTTGA
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Protein sequence | MINKLLKNWI FLLSLLVIVL AFFLSYIFPD LWIREGFSNG FFKGGFYFCG FFSALWLLQN HLILFRKEEC LRSLIICVGA ATVFLWTYKH KITFRMDLLL LFLCGFYSLV YRKWIMPDRV MIVFFLLIIL RFLGILWAED KAFAWQDVNT DKLYFLLLVL ITCIGFRIKE QESMSFITLC FKLFLLLLTL NISAYIFIQK AINLYFFSFL AFNKGYMNYY ELLLGWSIFK HPSFIAWIML VIWGLGVLVW RKNKELISLP EVILYGVLLF CFVFMLQARV AIIGFPLCLL ILGWFYISKE WTIRKRIITE IGLFSMGLLG IYWLVTHTTF FADSAREKML IKAKESINHH FIIGAGTSYE KLLANETIGL VHIHNDFLAT FIDLGMVGFS LLLLWIFTIY QKGIYNRDNY IIYCLMTFLL FMNTDVVLNY QPGVLILLPF LIFVFFKQEK TLNLYYNKG
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