Gene Coch_0957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0957 
Symbol 
ID8367376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1117099 
End bp1118334 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content45% 
IMG OID644983382 
Producthypothetical protein 
Protein accessionYP_003141073 
Protein GI256819794 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAT TTCTTTACAT CGGTTTAAGC GCTTTATGCC TTTTCACAGG TTGCCAAAAA 
GACAATAACA GCGAAGATAA CGGCACTCTT ATCTCCAACA ACACCCCCTT CCCAATGATG
GCGTGGATAG GGCTCTCCCC TCAATCCTCT ACTGAAGCCT ATCAAGAGAT GAAACAAGCG
GGCTTAAATT ACAATATGTA CCCCTATTAT TCCACCCTTT CCCAAGTGAA AGAGGCTTTG
AATAAGATGC AAAACCTACA AATGAAGAGT ATTGTAAGTT GCTCAGAACT CTCTACCGAT
ACCGAAGCAA CCATTAAAGC CCTAAAAGAC CACCCTGCTG TGGCAGGCTG GTTTATGGCA
GACGAACCCT CAATGAAAGA TTTAGATAAG ATAGCTGCGA AGATGAAACG CTTTCAGCAA
ATCGATAAAA AAGGCATCTG CTATGTGAAT TTCCTCTCAA TAGACACTTC CGAAAAGCAA
TTAGGCGCCT CCTTTAATGC TTATCTTGAA AAAGCTACCC GCACCCTCCC TCTGCAAATG
CTCTCTTCTA CCTTCTACCC TATCGTACTC AACAAAGGAG CAAAAGAGAG AACCGTAAAC
GGATTGTGGT ATAAAAACTT AGAAGTCTTC TCGGCAAAAG CCAAAGAATT ACGCATTCCT
CTATGGACGC TCGTGCTATC ATCGTCCCAC CCTCTCGGTG AAGGTGGATA TCCAGAACCT
ACCCTTGCCG ACCTCCGCTT GCAACTGTAC ACCAACTTAG CCTATGGTTC GCAACTGATG
CAGTTCTTCA CCTACACCAC CCCTCCTGAT AACCTAACTT ACAAAGCGCC TATTGCGCCC
GATGGCTCTA AAAATGCTAC CTATTACCGA TTAGCGCAAG CCAATGCCGA AGTACAGAAA
CTTTCCGGCG TGTTCGTAGG AGCAAAGATG CTCAACGTAT GGCATACCGG CAAAAGCATT
CCCGCAGGCA CAAAAAGATT GGTTTTGCCC AAAAACTTTG AAGTCCTCAA AACAGGCGAT
ATAGGGGCAA CTGTTTCGCT CTTGCAGAAC GGGTCACGCT ACTATTTGAT GATTGTAAAC
CACAGTCCTC TCAAAACGTT GCCCTTAGAG ATAAAAGCCA CTGCCGAAGT ACAAGAAGTA
AGCAAAGAAG CCCGCTTGCT CCCGGTCGAT TGGACAACCT CTAAAACATA CACCTTAGAA
GCAGGAGATA TGCGCCTTTT CTCGTGGACA AAATAA
 
Protein sequence
MKRFLYIGLS ALCLFTGCQK DNNSEDNGTL ISNNTPFPMM AWIGLSPQSS TEAYQEMKQA 
GLNYNMYPYY STLSQVKEAL NKMQNLQMKS IVSCSELSTD TEATIKALKD HPAVAGWFMA
DEPSMKDLDK IAAKMKRFQQ IDKKGICYVN FLSIDTSEKQ LGASFNAYLE KATRTLPLQM
LSSTFYPIVL NKGAKERTVN GLWYKNLEVF SAKAKELRIP LWTLVLSSSH PLGEGGYPEP
TLADLRLQLY TNLAYGSQLM QFFTYTTPPD NLTYKAPIAP DGSKNATYYR LAQANAEVQK
LSGVFVGAKM LNVWHTGKSI PAGTKRLVLP KNFEVLKTGD IGATVSLLQN GSRYYLMIVN
HSPLKTLPLE IKATAEVQEV SKEARLLPVD WTTSKTYTLE AGDMRLFSWT K