| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0943 |
|---|
| Symbol | |
|---|
| ID | 8367362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 1098852 |
|---|
| End bp | 1100438 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644983368 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003141059 |
|---|
| Protein GI | 256819780 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.142967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TGTACGTTTT ATGCATCTTG CTCATCGCTT TTGCGTGCAA GAAAGACAAT
GATGAAACGC TCCCACTGAG CGCTGAAAAA GACATTCTTT CGTTTGTCTT TACCGTAGAG
GGTAACACTT ATAGTGGTAC TATCAGCAAT ACCACTATCA CCGCCCAATT ACCTGAAGAC
ACCGATGTCA CCACCCTTAC TCCTACCATC ACGGTTTCTA AGGGCGCAAC CGTAAGCCCT
AATACAGGGG TAGCTCAAAA CTTCTCTAAG GAAGTAACCT ACACTGTAAC CGCCGAAAAC
AAAAGTACTA AAACCTACAA AGTACTGGTT ACCACCGAAA AGACCGAACA ACCGCAAGTC
CCAATAGAAA TTGGGCACGT TCCTAATGAA TATACGGTAA ACAAAGCAGG AGGCGAGGTG
ATTTTCTTCG AGGTAAATAC ATTACCCGTC AAAAAAGAGC AAATAAAAGT AAAGCTCCTT
AAATACAGAA GCGCGCTCTC TTACGACCTC AAAGTACAAA AGATAGACAA AAAAGAAAGA
CGTGTATATG TGGTCTTGCC CGCAACTTAT AAAAACGGTC AATATCGCTT TAAAGCAACC
TTCGACAAAG AAGAAGTCGA AAGTGGTGTT TTTACCTTAG ATAGTAGTGA GATTGTTTTA
GATGTTTTAG ATATTAATCT TTTTGAAGGT CCTGTACAAA CATTAGCGAC TACCAACTTG
CAAGTCTTTA AAGTGCTAGT ATACGCTAAT GCTGAAGCCT TAAAAAAATA CACCTATTAC
CTACGCAAAA ACGGACAAGA TTACCAGCTT ACAGTTGCAG AAATGTCTGG TTACAACCTC
GAATTTAAGA TGTTCAATAC ACCAGCTGGA GCTTTCAGCG GAGGTAATGA CTTTAAGTTT
GTAGTAAAAG GGGGTGCTAA AGAGCAAGTA CTTCCTTTTG TAAACAGCGA CGGACAAGCG
ATAAACATAG TACCTACTTA TGCCCCAGTA ATCAAATCTC TCTCTGCAAC TACCCTAAAA
ACAGGTGATG AATTAACCAT AACAGGAGAA AACTTTACCT ATATGAGCGT AGGTTTTAAT
ACTAATTACA GATATTGCGA GTTACTTTTA ATTAAAAACG GAGAAACAAA AGTAACTTTA
AGTACGTATA ATCACCGAGG TACCACCGCA ACTTTTAAAA TAGATAATAA TGTAGAGTCA
GGTACTTATA AGGTAGTATT ATCTTCTCAA ATACACCTGA AATCAGAGGT TTTTGGTCAA
GAAATTACCG TTCAAAAAGT TGTTCCTGAA ACTCCTCCAC GTTTGAAAGT TAAAGGCACT
GCTGAGCTTA TAGACAAAGA CGCCTCTTTT TTCGCTAAAC AAATTAATAT TTTCTTTAAT
GAAGAAATAG GTAATGCTTC TATAAAAGCT ATTGTATTTC CTAATCTGAA AATAGAAAAT
ATGACTAGAT ATCCAGCAGC AGTAAGTACA CATAGACTAT CTGATAGTGA ATACGACTAT
TTATTAAAAG ACCTGCCCAA AGGCTATGTA CTCATAGAAG AAAACGGCAA AGAATATAAA
GCAGAATTCT CTTTGAGAAA AGTCTGA
|
|---|
| Protein sequence | MKKLYVLCIL LIAFACKKDN DETLPLSAEK DILSFVFTVE GNTYSGTISN TTITAQLPED
TDVTTLTPTI TVSKGATVSP NTGVAQNFSK EVTYTVTAEN KSTKTYKVLV TTEKTEQPQV
PIEIGHVPNE YTVNKAGGEV IFFEVNTLPV KKEQIKVKLL KYRSALSYDL KVQKIDKKER
RVYVVLPATY KNGQYRFKAT FDKEEVESGV FTLDSSEIVL DVLDINLFEG PVQTLATTNL
QVFKVLVYAN AEALKKYTYY LRKNGQDYQL TVAEMSGYNL EFKMFNTPAG AFSGGNDFKF
VVKGGAKEQV LPFVNSDGQA INIVPTYAPV IKSLSATTLK TGDELTITGE NFTYMSVGFN
TNYRYCELLL IKNGETKVTL STYNHRGTTA TFKIDNNVES GTYKVVLSSQ IHLKSEVFGQ
EITVQKVVPE TPPRLKVKGT AELIDKDASF FAKQINIFFN EEIGNASIKA IVFPNLKIEN
MTRYPAAVST HRLSDSEYDY LLKDLPKGYV LIEENGKEYK AEFSLRKV
|
|---|
| |