Gene Coch_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0942 
Symbol 
ID8367361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1096498 
End bp1098756 
Gene Length2259 bp 
Protein Length752 aa 
Translation table11 
GC content40% 
IMG OID644983367 
Producthypothetical protein 
Protein accessionYP_003141058 
Protein GI256819779 
COG category 
COG ID 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000187515 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCAC TTCCCCTATT AGCACTATTT CCGCTATCAC TTATAGCCCA AAACCCTATT 
CCTGCTGGCT CTTACAAAGC CAGCTCTCTT GGCAATGCTT TGGAGCTTAG GATTGGTAAT
AACAACACTT ACGAATTGGT AGGCGCTTCG GGCAACTATA CCTTAAAGGA TAAAAAAATA
GAGTTCTCTT CCGATGCGTC GTCTTTTTTG GTTGAGAAGA AACAGAGCAA TAGCTCTCAG
TTGCAAATTA CCTTTAAAAT AGGAACAGGG CTCTTTGGCG ACCCACATTT CTTATATGTA
GGCTATGAAA ACAACAAAGG TGAAGTGGAA TATGTGTGTG TACATAACAA AATCACTTCA
TTGGAAAATG TAGAAAAAAC AAAAGACAGC AATGGAGTTG GTTACTATGT ATTAGAAAGT
TTTGAAGTGC CACGTACTGA AAACCTTTAT CTAGTGAATG CCCATTCAGT AGCTTTCAAC
AATAAATCCA AAGAAGTAAT TATTGAGAAA TATCCTATCG GAAAGACAAC CAATGCCGTG
GAAGTAGAAT TTTTAGGAAC CAATAATATG CTTAATTTAA AAGGCACTTA CAACCCCGAT
AAAGGAACGA TTTCTCTTAC CGAAGGCGAT TCCGATAACG CAATTCTGTT CAGTAACAAG
GCAAGCACTC CTAATCCAGC AAAAGTAGCC CGTAGCAATA AGGAAAATGT AAAGAATTGG
AAATATCTCA TCGCTTTTGA GGAAGAACAG GATATCCCCG AATATAATCC TGAAAAAAGA
GCTAAGCAGA AAAGCCAAGC AGATATTTCA TTACCCAAGA ACTTGAAAAC TGCCCTTGCT
TCAGCCGATA AATATAGCCG TTTGGTAATA GTTTTCCAAC AACCCGATAA CAAAGAGGCT
CAACAACAAT TCGCTACCCT TTTTGCCAAA TATAAAGAAG AAGGCGGTAG CAATGGCTAT
CCGTATGAAC TCTATTTGGC TACTACCAAA GATATGAAAA CCCTCAAAGC CAAAGGCGTA
CCTACAGGTA ACCAAATGGC TGTGCTTGAC GTAGCCGGTG ATCTGCTCTA CAATCAGCCC
TCTACTATCG AAGAGGTTGC CAATGACGAA ATAGTAACAA GTGATTCCTA CGGACAGCAG
TTCGGTACGA TAGCTATGGC TCGTGCGCTC GACAAAGCTT TGGGAAATCC TAAACTCTCT
GTAAAAGACC TACAAGCTAT TTTTACCACT TTTCTCAAAA AGGACAGCCA GCGTGTGTAT
TTGTTAGCTA AAAATCGTCC CGTGCAAAAA ACAGGCGATG CTAATGAGGA AGAAGCCTTC
GACTATATAG CACAAGAGCA AGAAGATTAC TTCTCCGATT TTAAAAACCC CAAAGGCATC
TACCAAATGC AACTTACCCC TGAGCAAGTA ACTACCCAAT GGCAGCGCAT CGTAAACGCT
CATAAAAACG ATAGCAAACT CGATTCCGCA TATGCTTTCT TGCTCGCTCT TAATAGCAAT
GATAGCGATT ATTATTACCG AATTTTCAAT GCCGAAAAGC CTGCTTCTCT TGCTGATGTA
GATGCAATCG CTTATTTGGT GAAGTTCAGC GAGGAAATTA AAGTACATAA CGAAAAACTC
ATTCCTAAAA ACGATGACTA TACCGACTAT CAACAACGCT TAGAGAAAGG CGTAATAGAA
GCAAACTATG GACACTTCAG TACTCTTCTC GACCGTCTTG TATTCAACGA CAAAACTCTT
TTTGAACCTG TAAAAGCCGT TTATATCGAA GGTGTCAAAA AGAATGTACT TACCGCTGAT
GATTACATCG ATTTTCTCTA TGAAAACAAC GTAGAAGAAG CCAGTGCTTA TTTCAGCGAA
TACTATAAAA ACCTATTGAA GAGAGATAGT AACCTCATTG CAGCACTCGA TAAGGCTTTT
TCCGAAAGCG ATGAAGAAAA TAGCTGGAAG TATTACAAAA TGCGCTTTGC TAACCGCGCT
AATAATATCG CTTGGAAAGT GTACGAAGAA CATAAAAACG ACCCCGCTAA ATTAGCAGAA
CCCTATCAGT GGGCAAGCTC GGCAGTACAG TTAGAACCTG AGAATCCTTA TTACTTAGAT
ACCCTCGCTC ACCTCTTGTA CACACGCGGT GAAAAACAAG AAGCTATTAA GCTCGAAGAG
AAAGCCGTAA AACTCCTTTC AAAAACTAAT GATGAATTTG AGTCTCAACG CCAAGAGGTA
AAAGCTAATC TCGAAAAGAT GAAACGAGGA GAGATGTAG
 
Protein sequence
MKALPLLALF PLSLIAQNPI PAGSYKASSL GNALELRIGN NNTYELVGAS GNYTLKDKKI 
EFSSDASSFL VEKKQSNSSQ LQITFKIGTG LFGDPHFLYV GYENNKGEVE YVCVHNKITS
LENVEKTKDS NGVGYYVLES FEVPRTENLY LVNAHSVAFN NKSKEVIIEK YPIGKTTNAV
EVEFLGTNNM LNLKGTYNPD KGTISLTEGD SDNAILFSNK ASTPNPAKVA RSNKENVKNW
KYLIAFEEEQ DIPEYNPEKR AKQKSQADIS LPKNLKTALA SADKYSRLVI VFQQPDNKEA
QQQFATLFAK YKEEGGSNGY PYELYLATTK DMKTLKAKGV PTGNQMAVLD VAGDLLYNQP
STIEEVANDE IVTSDSYGQQ FGTIAMARAL DKALGNPKLS VKDLQAIFTT FLKKDSQRVY
LLAKNRPVQK TGDANEEEAF DYIAQEQEDY FSDFKNPKGI YQMQLTPEQV TTQWQRIVNA
HKNDSKLDSA YAFLLALNSN DSDYYYRIFN AEKPASLADV DAIAYLVKFS EEIKVHNEKL
IPKNDDYTDY QQRLEKGVIE ANYGHFSTLL DRLVFNDKTL FEPVKAVYIE GVKKNVLTAD
DYIDFLYENN VEEASAYFSE YYKNLLKRDS NLIAALDKAF SESDEENSWK YYKMRFANRA
NNIAWKVYEE HKNDPAKLAE PYQWASSAVQ LEPENPYYLD TLAHLLYTRG EKQEAIKLEE
KAVKLLSKTN DEFESQRQEV KANLEKMKRG EM