Gene Coch_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0938 
Symbol 
ID8367357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1091389 
End bp1091808 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content41% 
IMG OID644983363 
ProductFe-S metabolism associated SufE 
Protein accessionYP_003141054 
Protein GI256819775 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00125991 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATTC AACAGATTCA GAATGAGCTT ATTGAAGATT TTTCGCTGTT TGATGATTGG 
ACGCAACGTT ACGAATATCT GATAGAATTA GGCAAGTCGT TACCACTTAT CGACGAAAAG
TACAAGACGG AAGAGTACCT CATTAAAGGC TGTCAGAGTC AGGTGTGGTT ACACGCCGAA
GAGCAAGACG GTAAGCTTAT CTTTACCGCC GATAGCGATG CGATTATCAC CAAAGGGATT
GTTGCTTTAT TAGTGAAAGT GTTCTCTGAC CAAACGGCTG AGGATATCCT AAAAGCGGAT
ATGAGTTTTA TTGACAAAAT AGGACTGAAA GACCATCTAT CTCCTACTCG TGCGAATGGG
TTGGTGAGTA TGATAGGACA AATGAGGGGA TATGCTGCTA AGGTGTTAGG GAATAGATAA
 
Protein sequence
MTIQQIQNEL IEDFSLFDDW TQRYEYLIEL GKSLPLIDEK YKTEEYLIKG CQSQVWLHAE 
EQDGKLIFTA DSDAIITKGI VALLVKVFSD QTAEDILKAD MSFIDKIGLK DHLSPTRANG
LVSMIGQMRG YAAKVLGNR