Gene Coch_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0936 
Symbol 
ID8367355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1090033 
End bp1090932 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content42% 
IMG OID644983361 
Productconserved hypothetical protein, secreted 
Protein accessionYP_003141052 
Protein GI256819773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0362607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAC TTTTATTTTC AACTTTACTA TTGTCTTCAG TAGCTGTATT TGCTCAGGAA 
GACCAAACGA ATGACGGTGT AGCACAAGAC CCTACGGCAG CTCCAACAGA GGAAGCTCCT
GCTCCTCGAT GGACAAAGGG AGGTAACGCT TCACTGATGT TCTCGCAAGC CGCCTTCAAC
CACGATTGGA CAGGAGGGGG AACTAACAAC GTAGCAGCAA GCCTTGCGGT GAGCTATGCT
TTTAACTACA AGAAAGACAA ATGGGCGTGG GATAACAACG TATTTGTTGA TTACGGGATT
ACTAAACTTG AAGGTGATGA CTATTCAAGA AAAACTACTG ACCGTTTTGA GGTGAACTCA
GTACTCGGTT ACCAATTGAA CAACCCTCAG TGGTACTATT CATTCTTCTT GAACTTCAAA
ACACAAATGA CCGATGGTTA CAAATATGAG AGCACAGGTC GTACGCTCAT AAACCAAATG
CTTTCACCTG GATACTTACA ATTTGGTCCT GGTATGTTGT GGAAGAAGAG CGATAACCTA
AAAGTGAACT TGGCTCCTGC AACTTCTAAA ATCACGACTG CTAAAAGCCG TTGGACAGAA
ACAGGTCCTT TCTACGGTGT TGAACAAGGA AAGAACATTC GTTATGAACT CGGTTTCTAC
TTGAACGGTT ATGCTAAGTT TACTGTAATG GACAATGTGT CTTTCGAGAA TATCCTCAGC
TTGTACAGCA ACTATCTCGA CAAACCACAA AACGTAGACT TGGATTATAC TGCAAACATT
GTGATGACTA TCAACAAGTA CTTATCAGCT AACTTTACTT TCCAAGCTAT CTACGACGAC
GCTGCTAAAG CCTTCCAAAT TCGTGAAGTA TTGGGCTTAG GAGTAAACTA CAAGTTTTAG
 
Protein sequence
MKRLLFSTLL LSSVAVFAQE DQTNDGVAQD PTAAPTEEAP APRWTKGGNA SLMFSQAAFN 
HDWTGGGTNN VAASLAVSYA FNYKKDKWAW DNNVFVDYGI TKLEGDDYSR KTTDRFEVNS
VLGYQLNNPQ WYYSFFLNFK TQMTDGYKYE STGRTLINQM LSPGYLQFGP GMLWKKSDNL
KVNLAPATSK ITTAKSRWTE TGPFYGVEQG KNIRYELGFY LNGYAKFTVM DNVSFENILS
LYSNYLDKPQ NVDLDYTANI VMTINKYLSA NFTFQAIYDD AAKAFQIREV LGLGVNYKF