| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0935 |
|---|
| Symbol | |
|---|
| ID | 8367354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 1089267 |
|---|
| End bp | 1089767 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644983360 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_003141051 |
|---|
| Protein GI | 256819772 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0225021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAGAG AGGCTTTCCA AAAAGAGAGC GTTGCTAAAG ATGCCTTGTT GTTGGACTTC
GGACAAGTGT GTGAGCATTA TTACTTTGTA AACAAAGGAG CTCTTAGGAT ATTCTTTTAC
GATGAAGGAG AGGAATACAC GAGCTGGATA GCTTTTGAAG ATTACTTTTT TACAGAGCAA
AATAGTTATA TAAATTGCTT ACCTTCTCGT TATGCTATTA CAGCTATTGA AGAGACTGAG
GTACTGAAAA TACACAAACA ACAAATGCTT TCACTTTTAC AAGATAGCTA TGAGTGGCAA
CAGTTCTTCA TACAAAATGA GCAACAAACA ATATTACGAC TGATGGAAAC TATTGAGCTT
TTCCAAAGAC AATCGGCTAA AGAGCGATAT GAAGCTTTGT TCAGCTTTCC TGCCTTTATA
CAAAAAGTGA AACAAAAAGA CCTTGCCACA ATGCTCGGAA TGACTAAATA TTCTATCAGC
AGACTAAAAT CTTACAAGTA A
|
|---|
| Protein sequence | MLREAFQKES VAKDALLLDF GQVCEHYYFV NKGALRIFFY DEGEEYTSWI AFEDYFFTEQ
NSYINCLPSR YAITAIEETE VLKIHKQQML SLLQDSYEWQ QFFIQNEQQT ILRLMETIEL
FQRQSAKERY EALFSFPAFI QKVKQKDLAT MLGMTKYSIS RLKSYK
|
|---|
| |