Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0928 |
Symbol | |
ID | 8367347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1077051 |
End bp | 1079237 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644983353 |
Product | hypothetical protein |
Protein accession | YP_003141044 |
Protein GI | 256819765 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.453447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATTTC TTACTTTCAT AACAATAACT ATCCTCTCCT GTGCTACTGC TGTAGCGCAG GAGTTATTTT CGCCTAACAA AGCGCTGAAA CTCTCTTTTT CGCTCAGCGC GGAAGGTACT CCTGTCTATT CGCTTTTTTA CAAGGGAAAA GAAGTAGTTA AACCGAGTAG ATTAGGTATT GAACTATTTA GCTCCAATGA AGTGAAATTT GGCGCTGAAA TCACCAAAAA AGAGGGGGTA AACACCTCTC TCTACCATAA TTTTGAAGTG GTAAATACCC AAAATACAAC CGTTGATGAA ACTTGGCAAC CCGTATGGGG CGAAAGCCAA AACATTCGCA ACCACTACAA CGAGCTATTG GTGAGCCTCA AACAGAAGGA CACGCACCGA GAAATGAACC TGCGTTTTAG ATTGTTTGAC GACGGATTGG GCTTCCGCTA TGAGTTCCCC GAACAAAAAC AAATGCCTTA CTTTGTGATA AAAGAAGAAC GCACCGAGTT TGCAATGACG GGTGATCACC AAGCGTGGTG GATACCAGGG GATTATGATA CCCAAGAGTA CGACTACCAG CAATCGCGCC TCTCCGAAAT ACGCGCTATC AACCAAAAAA GGCGTCAGGC GAATTTAGCA CAAACAGGAT TTTCGGATAC AGGTGTACAA ACTGCTTTAA TGCTCAAAAC TGACGATGGG CTCTACATCA ACCTGCACGA AGCTGCTTTA GTAAACTACG GGGCGATGCA CCTCAACCTC AACGATAAGA CCTTCGTGTT CCAATCGTGG ATTACCCCCG ATGCCAACGG CGCCAAAGGT TATATGCAAA CCCCTGCCCA AACGCCTTGG CGTACGGTAA TTGTAAGCGA TGATGCCCGC GACATTTTGG CTTCGGATAT CACCCTCAAC CTCAACGAAC CTTGTGCTTT GGCTGATACT TCGTGGATTC ACCCGATGAA GTACGTAGGG GTATGGTGGG AAATGATTAC CGGTATGAAA GAATGGTCGT ATACTTACGA TGTACCCAGT GTGCATATCG GTAAAACCGA TTACACTACC CTCAAACCCC ACGGCAAGCA CGGGGCTACT ACCGAAAATG TGAAGAAATA TATTGACTTT GCTGCCGAAA ACGGTTTTGA TGGCGTACTG GTAGAAGGTT GGAACATCGG GTGGGAAGAT TGGTTTGGAC ACTCTAAAGA TTTGGTATTC GACTTCCAAA CACCTTACCC CGATTTTGAT ATTGAAGCTA TTCACCAATA CGCCAAAAGC AAGGGAATTA AGATGATTAT GCACCACGAA ACCTCCTCGT CTATCCGCAA CTACGAGCGT TTTATGGACA AAGCCTATCA GCTGATGAAC CAATACGAAT ACCCTGCCGT AAAAAGCGGT TATGTGGGCA ATATCATTCC GCGAGGCGAA AACCATTACA GTCAGTGGGT GAATAATCAC TACCTTTATG CTATTAAAAA AGCCGCCGAC TACCGCATTA TGGTGAATGC GCACGAGGCA GTGCGCCCTA CGGGTTTGTG TCGCACCTAT CCTAACCTCA TAGGCAACGA GTCGGCACGC GGAGGTGAGT ACCAAGCCTT TGGCGGCAGC AAGCCTAATC ACGTGTGTGT GTTGCCCTTC ACCCGACTCA TTGGCGGACC AATGGACTAT ACCCCTGGGG TGTTTGAAAT GGACATCAGC AAGAACAACC CCAACAATCA TTCACACTGC AATGCTACTT TAGCGAACCA ATTGGCATTG TACGTAACGA TGAGCAGTCC GCTGCAAATG GCATCCGACC TTCCTGAGAA CTACCGCCGT TTTCCCGATG CTTTTCAGTT TATCAAAGAG GTTGCTCTCG ATTGGAGCGA AAGTCACTAT TTAGAAGCCG AACCAGGGGC TTATATCACT GTGGCACGCA AAGCCAAAGG CACTCGCAAT TGGTTTATAG GCAATACTGC CAGCAAGGAT TTTACCTCCA AGATTCATTT CAGTTTCTTA GAACCCAAAA CTACTTATGT AGCCACTATC TACGCTGATG CCAAAGATGC CAACTACAAA ACCAATCCAC AAGCCTATAC CATTCAGAAA ATATTGGTAA CCAACAAGAG CAAACTCACC CTGCACTCAG TAGCAGGCGG GGGTTATGCC ATTAGCTTGT TCCCCCTCAC TGATAAGGCA CAAGCCAAAG GATTAAAAAA ACGATAG
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Protein sequence | MRFLTFITIT ILSCATAVAQ ELFSPNKALK LSFSLSAEGT PVYSLFYKGK EVVKPSRLGI ELFSSNEVKF GAEITKKEGV NTSLYHNFEV VNTQNTTVDE TWQPVWGESQ NIRNHYNELL VSLKQKDTHR EMNLRFRLFD DGLGFRYEFP EQKQMPYFVI KEERTEFAMT GDHQAWWIPG DYDTQEYDYQ QSRLSEIRAI NQKRRQANLA QTGFSDTGVQ TALMLKTDDG LYINLHEAAL VNYGAMHLNL NDKTFVFQSW ITPDANGAKG YMQTPAQTPW RTVIVSDDAR DILASDITLN LNEPCALADT SWIHPMKYVG VWWEMITGMK EWSYTYDVPS VHIGKTDYTT LKPHGKHGAT TENVKKYIDF AAENGFDGVL VEGWNIGWED WFGHSKDLVF DFQTPYPDFD IEAIHQYAKS KGIKMIMHHE TSSSIRNYER FMDKAYQLMN QYEYPAVKSG YVGNIIPRGE NHYSQWVNNH YLYAIKKAAD YRIMVNAHEA VRPTGLCRTY PNLIGNESAR GGEYQAFGGS KPNHVCVLPF TRLIGGPMDY TPGVFEMDIS KNNPNNHSHC NATLANQLAL YVTMSSPLQM ASDLPENYRR FPDAFQFIKE VALDWSESHY LEAEPGAYIT VARKAKGTRN WFIGNTASKD FTSKIHFSFL EPKTTYVATI YADAKDANYK TNPQAYTIQK ILVTNKSKLT LHSVAGGGYA ISLFPLTDKA QAKGLKKR
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