Gene Coch_0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0928 
Symbol 
ID8367347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1077051 
End bp1079237 
Gene Length2187 bp 
Protein Length728 aa 
Translation table11 
GC content46% 
IMG OID644983353 
Producthypothetical protein 
Protein accessionYP_003141044 
Protein GI256819765 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.453447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTC TTACTTTCAT AACAATAACT ATCCTCTCCT GTGCTACTGC TGTAGCGCAG 
GAGTTATTTT CGCCTAACAA AGCGCTGAAA CTCTCTTTTT CGCTCAGCGC GGAAGGTACT
CCTGTCTATT CGCTTTTTTA CAAGGGAAAA GAAGTAGTTA AACCGAGTAG ATTAGGTATT
GAACTATTTA GCTCCAATGA AGTGAAATTT GGCGCTGAAA TCACCAAAAA AGAGGGGGTA
AACACCTCTC TCTACCATAA TTTTGAAGTG GTAAATACCC AAAATACAAC CGTTGATGAA
ACTTGGCAAC CCGTATGGGG CGAAAGCCAA AACATTCGCA ACCACTACAA CGAGCTATTG
GTGAGCCTCA AACAGAAGGA CACGCACCGA GAAATGAACC TGCGTTTTAG ATTGTTTGAC
GACGGATTGG GCTTCCGCTA TGAGTTCCCC GAACAAAAAC AAATGCCTTA CTTTGTGATA
AAAGAAGAAC GCACCGAGTT TGCAATGACG GGTGATCACC AAGCGTGGTG GATACCAGGG
GATTATGATA CCCAAGAGTA CGACTACCAG CAATCGCGCC TCTCCGAAAT ACGCGCTATC
AACCAAAAAA GGCGTCAGGC GAATTTAGCA CAAACAGGAT TTTCGGATAC AGGTGTACAA
ACTGCTTTAA TGCTCAAAAC TGACGATGGG CTCTACATCA ACCTGCACGA AGCTGCTTTA
GTAAACTACG GGGCGATGCA CCTCAACCTC AACGATAAGA CCTTCGTGTT CCAATCGTGG
ATTACCCCCG ATGCCAACGG CGCCAAAGGT TATATGCAAA CCCCTGCCCA AACGCCTTGG
CGTACGGTAA TTGTAAGCGA TGATGCCCGC GACATTTTGG CTTCGGATAT CACCCTCAAC
CTCAACGAAC CTTGTGCTTT GGCTGATACT TCGTGGATTC ACCCGATGAA GTACGTAGGG
GTATGGTGGG AAATGATTAC CGGTATGAAA GAATGGTCGT ATACTTACGA TGTACCCAGT
GTGCATATCG GTAAAACCGA TTACACTACC CTCAAACCCC ACGGCAAGCA CGGGGCTACT
ACCGAAAATG TGAAGAAATA TATTGACTTT GCTGCCGAAA ACGGTTTTGA TGGCGTACTG
GTAGAAGGTT GGAACATCGG GTGGGAAGAT TGGTTTGGAC ACTCTAAAGA TTTGGTATTC
GACTTCCAAA CACCTTACCC CGATTTTGAT ATTGAAGCTA TTCACCAATA CGCCAAAAGC
AAGGGAATTA AGATGATTAT GCACCACGAA ACCTCCTCGT CTATCCGCAA CTACGAGCGT
TTTATGGACA AAGCCTATCA GCTGATGAAC CAATACGAAT ACCCTGCCGT AAAAAGCGGT
TATGTGGGCA ATATCATTCC GCGAGGCGAA AACCATTACA GTCAGTGGGT GAATAATCAC
TACCTTTATG CTATTAAAAA AGCCGCCGAC TACCGCATTA TGGTGAATGC GCACGAGGCA
GTGCGCCCTA CGGGTTTGTG TCGCACCTAT CCTAACCTCA TAGGCAACGA GTCGGCACGC
GGAGGTGAGT ACCAAGCCTT TGGCGGCAGC AAGCCTAATC ACGTGTGTGT GTTGCCCTTC
ACCCGACTCA TTGGCGGACC AATGGACTAT ACCCCTGGGG TGTTTGAAAT GGACATCAGC
AAGAACAACC CCAACAATCA TTCACACTGC AATGCTACTT TAGCGAACCA ATTGGCATTG
TACGTAACGA TGAGCAGTCC GCTGCAAATG GCATCCGACC TTCCTGAGAA CTACCGCCGT
TTTCCCGATG CTTTTCAGTT TATCAAAGAG GTTGCTCTCG ATTGGAGCGA AAGTCACTAT
TTAGAAGCCG AACCAGGGGC TTATATCACT GTGGCACGCA AAGCCAAAGG CACTCGCAAT
TGGTTTATAG GCAATACTGC CAGCAAGGAT TTTACCTCCA AGATTCATTT CAGTTTCTTA
GAACCCAAAA CTACTTATGT AGCCACTATC TACGCTGATG CCAAAGATGC CAACTACAAA
ACCAATCCAC AAGCCTATAC CATTCAGAAA ATATTGGTAA CCAACAAGAG CAAACTCACC
CTGCACTCAG TAGCAGGCGG GGGTTATGCC ATTAGCTTGT TCCCCCTCAC TGATAAGGCA
CAAGCCAAAG GATTAAAAAA ACGATAG
 
Protein sequence
MRFLTFITIT ILSCATAVAQ ELFSPNKALK LSFSLSAEGT PVYSLFYKGK EVVKPSRLGI 
ELFSSNEVKF GAEITKKEGV NTSLYHNFEV VNTQNTTVDE TWQPVWGESQ NIRNHYNELL
VSLKQKDTHR EMNLRFRLFD DGLGFRYEFP EQKQMPYFVI KEERTEFAMT GDHQAWWIPG
DYDTQEYDYQ QSRLSEIRAI NQKRRQANLA QTGFSDTGVQ TALMLKTDDG LYINLHEAAL
VNYGAMHLNL NDKTFVFQSW ITPDANGAKG YMQTPAQTPW RTVIVSDDAR DILASDITLN
LNEPCALADT SWIHPMKYVG VWWEMITGMK EWSYTYDVPS VHIGKTDYTT LKPHGKHGAT
TENVKKYIDF AAENGFDGVL VEGWNIGWED WFGHSKDLVF DFQTPYPDFD IEAIHQYAKS
KGIKMIMHHE TSSSIRNYER FMDKAYQLMN QYEYPAVKSG YVGNIIPRGE NHYSQWVNNH
YLYAIKKAAD YRIMVNAHEA VRPTGLCRTY PNLIGNESAR GGEYQAFGGS KPNHVCVLPF
TRLIGGPMDY TPGVFEMDIS KNNPNNHSHC NATLANQLAL YVTMSSPLQM ASDLPENYRR
FPDAFQFIKE VALDWSESHY LEAEPGAYIT VARKAKGTRN WFIGNTASKD FTSKIHFSFL
EPKTTYVATI YADAKDANYK TNPQAYTIQK ILVTNKSKLT LHSVAGGGYA ISLFPLTDKA
QAKGLKKR