Gene Coch_0917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0917 
Symbol 
ID8367336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1067865 
End bp1068542 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content47% 
IMG OID644983342 
ProductDNA repair protein RadC 
Protein accessionYP_003141033 
Protein GI256819754 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.372898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTA AAAACTGGGC GGATACCGAT AAACCGCGTG AGAAGATGAT TTCGCAGGGT 
AAAACAGCCC TTAGTAATGC CGAGCTTTTG GCGATACTAT TAGGCTCGGG GTCGGCAGAT 
GAGAGTGCTG TGGAGCTGAG TAGGCGCATT TTGGCTTCGG TGAATAATAG CTTGACGACT 
TTGGGCAAAC AGAGTTTGCA ACAATTACAA GCCTTCAAAG GTATTGGACA GGCAAAAGCC 
ATTACCATTC TCGCTGCTAC CGAAATGGGC AGGCGACGCG CTGCCGAAAC CCCCGAACCA 
CAGCCCAAAA TAGAGGTAGC TCATAACGTT TTTGTCCTAA TGCAACCTCT CATAGGCGAG 
TTGCCCCACG AGGAATTTTG GGTACTTTAC CTCAATAGCA CCAATCGTGT GATACACAAA 
GCACGACTTT TTTCAGGAGG GATTACCCAT ACTACCGTAG ATGTGCGACT GCTCTTCAAA 
ACAGCGTTGG AGCAAGGAGC TATTGCGTTG ATATTAGTAC ACAACCACCC TTCGGGTAGC 
ACCACTCCCA GCAAGGAAGA TATCGAACTC ACCCAGAGAG TAAAAACAGC AGGAGAAATG 
TTAGACATCA AACTCTTAGA CCACGTAATC GTTACCGAGA AAGAGTATTT GAGTTTTTTG 
GACGAAAGGC TTTTCTAA
 
Protein sequence
MTIKNWADTD KPREKMISQG KTALSNAELL AILLGSGSAD ESAVELSRRI LASVNNSLTT 
LGKQSLQQLQ AFKGIGQAKA ITILAATEMG RRRAAETPEP QPKIEVAHNV FVLMQPLIGE 
LPHEEFWVLY LNSTNRVIHK ARLFSGGITH TTVDVRLLFK TALEQGAIAL ILVHNHPSGS 
TTPSKEDIEL TQRVKTAGEM LDIKLLDHVI VTEKEYLSFL DERLF