Gene Coch_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0912 
Symbol 
ID8367331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1062677 
End bp1064191 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content50% 
IMG OID644983337 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_003141028 
Protein GI256819749 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACAAA AAGGAAAAGT AGCACAAGTA ATTGGACCTG TGGTCGATGT AGAGTTCGCC 
TCTGATAATG AACTCCCACG CATTTATGAT TCCTTAGAAA TCACAAGACC CGACGGTACC
AAACTCATAT TAGAAGTACA ATCGCATATA GGCGAAGACG TGGTGCGCGC CATCTCTATG
GACTCCACCG AAGGACTTAG CCGCGACACC GAAGTGATTG CCACAGGCAG TCCTATCAAA
ATGCCCGTAG GACACGATAT CTACGGTCGC CTCTTCAACG TAATTGGTGA CGGGGTCGAC
GGACTCGGCA ACCTGCCCAA AGACGGCGAC AACGGCTTGC CTATTCACCG CGAAGCTCCC
AAGTTCGAAG AACTCTCCAC CACTACCGAA GTACTCTTCA CCGGTATCAA AGTCATCGAC
CTTATCGAAC CTTATGCCAA AGGAGGTAAA ATCGGTCTGT TTGGCGGTGC GGGTGTAGGT
AAAACGGTGC TCATTCAAGA ATTGATTAAT AACATCGCCA AAGGGCACGG CGGTCTATCA
GTATTCGCTG GGGTAGGCGA ACGTACCCGT GAAGGAAACG ACCTGCTACG CGAGATGCTC
GAATCGGGCA TTATCAAATA TGGCGAAGGC TTTATGGAAT CGATGGAAAA AGGCGGTTGG
GATTTGAGTA AAGTAGACCG CAAGGCACTT AAAGAATCCA AAGCAACCTT CGTTTTCGGG
CAAATGAACG AACCTCCTGG AGCACGTGCG CGTGTAGCCC TCTCAGGACT CACTATTGCC
GAGTACTTCC GCGATGGTGC TGGCGAAGGT CACGGTAAAG ACGTGCTTTT CTTCGTCGAT
AATATCTTCC GTTTCACTCA AGCAGGTTCT GAGGTATCCG CCCTTTTAGG TCGTATGCCA
TCAGCGGTGG GTTACCAACC TACGTTGGCT ACCGAAATGG GTGCGATGCA AGAGCGCATC
ACCTCTACCA AGCACGGTTC TATCACCTCA GTACAAGCGG TATATGTACC TGCCGACGAC
CTTACTGACC CCGCTCCGGC AACTACCTTT GCCCACCTCG ATGCTACAAC CGTATTATCG
CGTAAAATCG CCGAGCTCGG TATCTACCCT GCGGTAGACC CTCTCGATTC TACTTCGCGT
ATCCTTACCC CCGAAATTTT GGGTAAAGAG CACTACGAGT GCGCACAACG CGTGAAAGAG
CTCTTACAAC GTTACAAACA ATTGCAAGAC ATTATCGCTA TCCTCGGTAT GGAAGAGCTT
TCAGAAGACG ATAAAGTAGC CGTTGCTCGT GCACGTCGCG TACAGCGTTT CTTGTCACAG
CCTTTCCACG TAGCCGAGCA GTTTACCGGA TTACCAGGAG CTTATGTAGA TATCAAAGAT
ACTATCAAAG GCTTTAATAT GATTCTCGAC GGCGAACTCG ACCATCTTCC AGAAGCTGCC
TTCAACCTTA AAGGCACCAT CGAAGAAGTA ATCGAAGCAG GTGAAAAAAT GCTTGCCGAA
GCACAAGCCT CTTAA
 
Protein sequence
MLQKGKVAQV IGPVVDVEFA SDNELPRIYD SLEITRPDGT KLILEVQSHI GEDVVRAISM 
DSTEGLSRDT EVIATGSPIK MPVGHDIYGR LFNVIGDGVD GLGNLPKDGD NGLPIHREAP
KFEELSTTTE VLFTGIKVID LIEPYAKGGK IGLFGGAGVG KTVLIQELIN NIAKGHGGLS
VFAGVGERTR EGNDLLREML ESGIIKYGEG FMESMEKGGW DLSKVDRKAL KESKATFVFG
QMNEPPGARA RVALSGLTIA EYFRDGAGEG HGKDVLFFVD NIFRFTQAGS EVSALLGRMP
SAVGYQPTLA TEMGAMQERI TSTKHGSITS VQAVYVPADD LTDPAPATTF AHLDATTVLS
RKIAELGIYP AVDPLDSTSR ILTPEILGKE HYECAQRVKE LLQRYKQLQD IIAILGMEEL
SEDDKVAVAR ARRVQRFLSQ PFHVAEQFTG LPGAYVDIKD TIKGFNMILD GELDHLPEAA
FNLKGTIEEV IEAGEKMLAE AQAS