Gene Coch_0909 details

Gene Information

• Locus tag: Coch_0909
• ID: 8367328
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: -
• Start bp: 1058116
• End bp: 1060056
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 644983334
• Product: hypothetical protein
• Protein accession: YP_003141025
• Protein GI: 256819746

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAT TATATACAAC TTTAGTTTGC TTGCTACTGA TTTTGGGTTG TAAGGACGAT 
AAAGACGAAA CACTCCCTTT GAGCGCTGAA AAAAACATAC TTTCGTTTGT CTTTACGCTT 
AACGATACCC CTTATAGTGC CACTATCAGT GGGACGACTA TCAGCGCACA GTTACCTGCC 
GATACCTCGC TAACTACCCT CACGCCTACT ATTAGCATTT CAAAAGGCGC GACTATAAGC 
CCTAACACAG GGATAGCTCA AGACTTTTCT AAAGAAGTAA GTTACACCGT AACTGCCGAA 
AACAAGAGTA CCAAAACGTA TAAGGTGATG GTAACCAAGA AGGAAAAAGA CGATGGAAAA 
GATGACGATA ACGACGGCAA AGACGATGAT AACAATGGCA AAGATGATGA CAATAATGGT 
AATGACAATG GTACAAAAAG CTCAGAAGCC GAAATATTAG CTATTACCTT TACCAATATT 
GATTATCCTG AAGATGTGAC TGTACTTGAC AAAGGAGAAA CTTATATAAA ATTAGAAGTC 
CCTGAGGGTA CTAATATAAA AGCGCTAACT TCAAGCATTA CCATTTCAGA AAGAGCTACG 
ATAGAACCTA AATCAGGAGC TACTTTAGAT TACTCTCAAG GAGTTCGCTA TACTATAACA 
GCCGAAGACA AAACAGAAAA AATATTTTAT GTGATTGTAG AAGAAGGATA CAATTCTTTT 
GAGAAAAGTT TCGAACTTCT TACTAAAAAC ACTGAATACC TAAAAGGTGG CGATGTTATC 
TCTATCGAAG TTGGAAGGCT GAAACCAAGA CATAAAAATA TAAAAGCTTA TATTAGTTAT 
AATAACAAAT CAAAAGTAGA GGCTAAAATT AAAAATATAG ATTATAATAA AAAGCTAATA 
GATGTTGTTT TACCCAACAC ATACACAAAT GGAGCCTATG AGATTAAAAT AAAGGTTAGT 
GATGGCAAAA AGGAAAACGA AGGATCTGTT TATTTTTTTC TAAATCAAGG AACACCTTTT 
TTTAAAGGAG TTTTATCTGA ATCAGGGATA CCTCGTCAAA GGGTATTACT TCCAAATGAA 
GAGTTTACAG CAGGTGTTTA TATTAATCCG AAAGATAAAG AAAACTATAG TTTTTATTTG 
CACAAGAATG GTCAAGATTA TTCTCTTATA GTAAAAAAAA TAGATACTTA CTATAATACG 
ATTAGATTTG AAACTCCTAA AAAACCTACA ACACCTTTGG AGAGTGGTTC TGATTTTCAA 
TTTGTTATAA AATATCAAGG GAAAGAGTAT GTATATCCTT TTAGGATTTA TGTTCAAATA 
GCCGATATTC CAACTAAACT AGAATTAGAT AATTACTCTC TCAAAAAAGG AGAAGAATTT 
ACTGTGTATG CAGAATGTGT GGGTATTCGA TACCAAGATA AACATACACC TCTTCCTAAA 
CTCAAATTAA TAAAAGAAGA TGGTAGTTTC AAATATATTG AAGCTCTACG ATTCCCTGAA 
AAAGGAATTC TATCCTTTTA TGCGCCCTTT AAAATCCCAA AAGACTTTGA ATCTGGTAAA 
TACAAATGGA CAGTTACTAA TTTCGTAGGA GAATCAGCAG TAGCTGATAA AATGATTACT 
ATCGAAGGCG CTACAACCCC AGTTGCTCCT TCACACCTAA AAGTTACTAA AGCTGAAATC 
GTAGATAAGA GTGCGAGGTT CTTTCCTAAG CAAGTGTATA TCACTTTCAA TGAAGCTATA 
GGTAATGCTA AATTAAAGGC TATTGTGTTT CCTAATCTGA AAATAGAAAA TATGATTACC 
TATAAAAGTG CCGTAACCTC TTCTCGCTTA TCAGATAATG ACTATAACTA TTTAATGAAC 
AACCTCCCCA AAGGTTATGT ACTCATTGAA GAAAACGGCA AGGAATACCA AGCTGAGTTT 
TCTTTAGTAA AAGGAAACTA A 

 

Protein sequence

MKKLYTTLVC LLLILGCKDD KDETLPLSAE KNILSFVFTL NDTPYSATIS GTTISAQLPA 
DTSLTTLTPT ISISKGATIS PNTGIAQDFS KEVSYTVTAE NKSTKTYKVM VTKKEKDDGK 
DDDNDGKDDD NNGKDDDNNG NDNGTKSSEA EILAITFTNI DYPEDVTVLD KGETYIKLEV 
PEGTNIKALT SSITISERAT IEPKSGATLD YSQGVRYTIT AEDKTEKIFY VIVEEGYNSF 
EKSFELLTKN TEYLKGGDVI SIEVGRLKPR HKNIKAYISY NNKSKVEAKI KNIDYNKKLI 
DVVLPNTYTN GAYEIKIKVS DGKKENEGSV YFFLNQGTPF FKGVLSESGI PRQRVLLPNE 
EFTAGVYINP KDKENYSFYL HKNGQDYSLI VKKIDTYYNT IRFETPKKPT TPLESGSDFQ 
FVIKYQGKEY VYPFRIYVQI ADIPTKLELD NYSLKKGEEF TVYAECVGIR YQDKHTPLPK 
LKLIKEDGSF KYIEALRFPE KGILSFYAPF KIPKDFESGK YKWTVTNFVG ESAVADKMIT 
IEGATTPVAP SHLKVTKAEI VDKSARFFPK QVYITFNEAI GNAKLKAIVF PNLKIENMIT 
YKSAVTSSRL SDNDYNYLMN NLPKGYVLIE ENGKEYQAEF SLVKGN