Gene Coch_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0908 
Symbol 
ID8367327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1057309 
End bp1058079 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content44% 
IMG OID644983333 
Productprotein of unknown function DUF1212 
Protein accessionYP_003141024 
Protein GI256819745 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.395602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCCA TTGAACGAGC GGCACGCCTT TTTGCCGATA TCAACGAACT GCTAATTTCC 
AGTGGTGCCA ATACCCGTAG GGTAGAACGC AATGTAGAAC GCATCTCTAA TGCACTGAAC
TACCATTGCG AGAACTTCTA TTCGCATTCG GCTATCGTGC TAACAATACA GGACAAAAGC
ACAGGCGAAA AAGAAACTAT CGTGCGCTCT ATCCCGCATC ACGGAGTGAA TTTCAGTGCG
ATTTCCGATA TTAGTATTCT ATCGTGGGAG GCTATCGAAA AGAAACTCCC TATTGAGGAA
ATCGAAGAGC AGGTAGCTAC CATCAAGGCA CGCCCACATT ACAATATGTA TGTAATGTGG
TTCTTCGTAT CAATAGCAGG AGGCTCATTA GCCTACGTAT TTGGCAAAGA AAACGCAAGT
TATGCCGAGT TCGCTATGTC GTTTCTCGCT ACTTTATTAG GGTTAGCAGG CAGACGTATT
TTGCAGTTGC GCAAGTTCAA CGTGTATATC TGTTGGGGTT GGGCTGCTTT CGTATCGGTG
GCTGTGATGA GCATCTTCCG CTTGCTTGGC GTACAAGACT ATCACAATGC CTTGGCAGCT
TGTGTATTGT GGTTAGTGCC TGGGGTACCT CTTATCAATG GCTTTATCGA TATGCTCTCA
GGCTGTATTG TAGCAGGAAT TGCTAAACTC ACTCACGCTG CTATTTTAGT GTTTATGATT
TCATTAGGTT TTTATTTAGC TTTACTATTA TTCGGTTATG AACTTCCTTG A
 
Protein sequence
MKPIERAARL FADINELLIS SGANTRRVER NVERISNALN YHCENFYSHS AIVLTIQDKS 
TGEKETIVRS IPHHGVNFSA ISDISILSWE AIEKKLPIEE IEEQVATIKA RPHYNMYVMW
FFVSIAGGSL AYVFGKENAS YAEFAMSFLA TLLGLAGRRI LQLRKFNVYI CWGWAAFVSV
AVMSIFRLLG VQDYHNALAA CVLWLVPGVP LINGFIDMLS GCIVAGIAKL THAAILVFMI
SLGFYLALLL FGYELP