| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0906 |
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| Symbol | |
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| ID | 8367325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1055991 |
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| End bp | 1056716 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644983331 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_003141022 |
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| Protein GI | 256819743 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.248468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAATA TATTACAAAA CATCGCCTTA GTACAACAAC GTATTGCCAA CACTTGTGAG
CGCGTAGGTC GCAAGCCGGA GGAAGTAAAG CTCCTCTTGG CTACTAAAAC GGTAACTCCT
GAGCGCATCA AAGTAGCATT AAATGCAGGA TATACGCTCA TCGCCGAAAA CAAAGTGCAA
GAACTCAAGG AGAAGTATGA AGCGCTGAAA GACACTCCAC ATACCAATCA TTTTATCGGT
CATTTACAAA CGAATAAGAT AAAAGATATT TTGCGTTACG AGGTGAGTTG TGTAGAATCG
GTAGACCGCC TCGATTTAGC CCAAAAACTC CACAACCGTT TGGAGAGTGA AGGTAAAGAA
CTCGATATCT TTATTCAGGT GAATACCTCT AACGAAGAAA GCAAGTTTGG TGCCGACCCC
TCTGAGGTAC TAAATCTTGT AAAGCAAGTG GCTACACTGC CTACCCTACA TATCAAAGGA
CTGATGACTA TCGGTCTGTT TAGTGCCGAA ACCGAAAAGG TGCGCGCCTG CTTTAAACTC
CTTAAACATC TCCAACAAGA GATTATTGCT CTCAACCTCC CTAATGTAGA CCCCCGAGAA
CTCTCAATGG GAATGAGTGG CGACCTCGAA ACCGCTATTG AAGAAGGTGC CACTATCGTG
CGCGTTGGTA CCGCTATCTT CGGTAAGCGC ATCTACCCCG ATAGCTACTA TTGGAATGAA
AAGTGA
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| Protein sequence | MENILQNIAL VQQRIANTCE RVGRKPEEVK LLLATKTVTP ERIKVALNAG YTLIAENKVQ
ELKEKYEALK DTPHTNHFIG HLQTNKIKDI LRYEVSCVES VDRLDLAQKL HNRLESEGKE
LDIFIQVNTS NEESKFGADP SEVLNLVKQV ATLPTLHIKG LMTIGLFSAE TEKVRACFKL
LKHLQQEIIA LNLPNVDPRE LSMGMSGDLE TAIEEGATIV RVGTAIFGKR IYPDSYYWNE
K
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