Gene Coch_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0883 
Symbol 
ID8367302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1040072 
End bp1041241 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content42% 
IMG OID644983308 
ProductDNA-cytosine methyltransferase 
Protein accessionYP_003140999 
Protein GI256819720 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCA TAGACCTATT CAGCGGTATT GGTGGCTTTT CGCTCGGATT TCAGCGAGCA 
GGCTACCATT TTACCGAGCA TTATTTCAGC GAAATAGATA AACACGCAAT CGCAAACTAT
AAAAACAATT TTCCAAATGC AAAATACATC GGAGATATTA CCACTCTTCA CGGAGGAGAC
TTTACAGGAA TTGACATTAT CACTTTCGGT TCGCCTTGCC AAGATTTCAG CCTTGCTGGG
AAACGTGCCG GACTCGCAGG CGCAAAAAGT AGCCTTATCC AATACGCAAT TGCCCTCATT
GCTAACGTCA GACCAAGTAT TTTTATCTGG GAGAACGTTA AAGGAGCTTT CAGCTCCAAT
GCTGGCGCAG ACTTTTGGGC AATTCTCCAA GCCTTTACCC ACATTGGGGG TTATAGACTT
GAATGGCAAT TGCTTAATAC ACGCTGGGTA TTACCCCAAA ATCGAGAGCG GATATATCTT
ATCGGACATC TTGCAGGACG AAGTGAGTGC GGAGTATTTC CTATCACAGA AGATGATAGA
CTGTTTAAAC GGGAGACAAG GAAAGAAAAT GGGGAATTTC CAAGTATAAA AACTTCACCT
GCACGAACAA TAACATCACG TTATCACAAA ATGGGGAGCA ATGATACTTA CATACAAGTA
GGTACTTACC GCACTCACAA CGACGGTAAG GGATTTAGAG AAGTAAAAAG CAATATTGCC
CCTACTATCC CCGCAAGAGC AAGGGAAGAT GGCAGTGGTA TGCCCGTAAT ACAACTTAAT
CCATCTAAGG AATCCAACGG CAGGCAACCC TATCAGCAAA ATAGAGTTTT TGACGAAAAA
GGAATAAGTC CCGCTCTAAC AAGACACAAT TCTGACTTTA TTATAAAGCA ACGTTCACGA
GGAAAAAACA AAGGTGCAGA CCTTAAAGTC TGCCCTACAA TATCGAGCAA CTCCTTTCAA
GAAAATAACC TACTGGGAGG CATTAGAAGA CTTACCGAAA TAGAATGCGA ACGCCTGCAA
GGATTTCCTG ACAATTGGAC ACAATACGGC GACTACAACG GCATAATAAA ACCAATAGCC
AAAACACAAC GCTACAAGCT TATTGGTAAT GCCGTAACAG TGGACATAGT AGAATTGATA
GCAAAACGAT TAAAATTTAC AAAACAATGA
 
Protein sequence
MKLIDLFSGI GGFSLGFQRA GYHFTEHYFS EIDKHAIANY KNNFPNAKYI GDITTLHGGD 
FTGIDIITFG SPCQDFSLAG KRAGLAGAKS SLIQYAIALI ANVRPSIFIW ENVKGAFSSN
AGADFWAILQ AFTHIGGYRL EWQLLNTRWV LPQNRERIYL IGHLAGRSEC GVFPITEDDR
LFKRETRKEN GEFPSIKTSP ARTITSRYHK MGSNDTYIQV GTYRTHNDGK GFREVKSNIA
PTIPARARED GSGMPVIQLN PSKESNGRQP YQQNRVFDEK GISPALTRHN SDFIIKQRSR
GKNKGADLKV CPTISSNSFQ ENNLLGGIRR LTEIECERLQ GFPDNWTQYG DYNGIIKPIA
KTQRYKLIGN AVTVDIVELI AKRLKFTKQ