Gene Coch_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0880 
Symbol 
ID8367299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1036085 
End bp1038346 
Gene Length2262 bp 
Protein Length753 aa 
Translation table11 
GC content40% 
IMG OID644983305 
ProductDNA methylase N-4/N-6 domain protein 
Protein accessionYP_003140996 
Protein GI256819717 
COG category[L] Replication, recombination and repair 
COG ID[COG0863] DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.842424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAGT ATCAAGAGTT TTTAAAATCA AAGGAACGAA AAGTAGCCGA AGCGGGTTTT 
GAACTTCCTG ATGAAGAATT AAACCCTAAC CTATTCAACT TTCAGCGTTA CATCGTGAGC
AAAGCACTAA GAATGGGGCG GTATGCCATA TTCGCCGATT GCGGACTTGG AAAGACCTTA
ATGCAATTGG AATGGGCACA CCAAGTAAGT AAGCACACAC AGAAGCCAGT GCTAATACTT
TGCCCTCTGG CGGTAGCCTA TCAAACCATA TCAGAGGGGC AAAAGTTCGG TATTAAGGTA
GAAAAGTATC ACGACAACGA ACCATTACAA GGCGTGTACA TCAGCAATTA CGAGCAGTTG
GATAATATCA ATACTGCTCA ATTCGTAGGG GTAGTGCTTG ATGAGAGTTC AATATTAAAG
AACTTCACCG GAAAGTATAA GAATGCCTTA ATTAAGGCTT TCAAAAACAC TCCTTACAAA
TTGTGTTGTA CGGCAACTCC AAGCCCTAAT GACTTGAATG AGATAGGCAA CCACTCCGAG
TTTCTTAATG TATTAGATGC TCAGGATATG CGGGCTAAGT GGTTCGTGCG TGATGAGGGA
ATGAACAACT ACCGCCTTAA AGGACACGCC ACTAATGACT TCTATGGGTG GATTAGTTCG
TGGGCAACTA TGCTTACAAA ACCCTCAGAT ATAGGATTTA GCGCTGAGGG CTATGAGTTG
CCAAAACTAA ACTACATCGA AAAGGAAATA CAGACACAGA AGCGTGATAA TGGTATGCTT
TTCAACCCTT ACTCGGTAAG TGCTACCGAG TTCCAAAAGG AATTACGCAA CACACTTGAC
CAACGCATTG AAGCGGTAGC CGAGATTGTG AATAATTCCG ATGAGGCATT TATTGTTTGG
GTAAATCAAA ATGAAGAGGA AAAGAAAGTA CTTGAACTCA TACCCGATGC GGTAGCGGTG
AATGGTAGCG AAAAAACAGA GGTCAAAGAA AAGAAACTAC TCGGATTTGC TAATGGTGAA
TTTAGGGTAT TGGTAACCAA GAAGAAAATA GCCCAGTTCG GTATGAATTT TCAGAATTGC
CATAATCAAA TATTCGCAAG CCTTGACTTC TCATTCGAGG GCACATACCA AGCCGTAAGG
AGGTCTTATC GCTTTGGACA AACAAAAGAA GTAAACATCT ATTTCATAAC CACTGACACA
ATGGAAAATG TAAAACAAAC AAGAGAACGC AAAGAACAAC AATTTAAGGA AATGCAGGAC
CAGATGAATA AATTCATAAA CGGTAACGCT TTCGGACTAC TCAATTCGTA TGAGTTTAAA
GAAGTGAAAA CGCCTAATTA TTGGCTGATG AAAGGCGACA GTTGCATTGA GATTAAACGC
ATTCCTGATA ACTCAGTAGA TTTAATCATA TTCAGCCCCC CGTTTAGTTC GTTATTCACC
TACTCTAACT ACATTCACGA TATGGGGAAT AATGAAAGCC ACGAAGATTT CTTTAAGCAA
TACACATTCC TTTTACACGA TTTGTATAGA ATATTGAAGC CTGGCAGGCT AATGGTTTGC
CACACCAAAG ATTTGGCGGT ATATAAGAAT TCAAGCGGTT ATACCGGACT ATACGACTTC
ACGGGAGACC ACCATAGAGC CGTTGAGGCG GTAGGATTTA AATATCACTC TAAGGTGAAT
ATCTGGACCG ACCCAGTTTT GGAAATGCAA CGTACCAAAA CGCAACGACT TCTATACAAG
CAACTGCGTA AGGATAGTAG TTACACGGGG GTAGGGCTAC CTGAATATTG CACTATATTT
CGCAAGTGGG AAGGAAATGA GGAAGATTGG ACACCAATTA ACAACAAGAA TAAAGAGAAT
TTTCCATTAG ATGTTTGGCA ACATTGGGCA TCGCCTACTT GGAATGTAGA GAAGGGAGAT
ATTGACCATC TACACGAAGT AATGGAAGAT TACAAAGTAA ATACGTGGTT TGATATTAAG
CGTACTGATG TACTCAACGG AAAGAAAGAG GCTACTGATT TAGGCGATGA AAAGCACATT
GCACCGTTGC AATTATCAGT TATCAAGCGT TGTGTGCAGA TGTGGAGCAA TAAGGGAGAA
ACTGTATTTA CACCATTCTT AGGAATAGGA AGTGAGATAT ACGAGGCAGT TACATTAGAA
CGCTACGGTA TAGGCATAGA ACTCAAAGAT AAGTATTTTG AAACCGCCGT TAAGAATATT
AATATGGTAA CCGAGAAGCA ACGACAATTA ACGTTATTCT AA
 
Protein sequence
MNEYQEFLKS KERKVAEAGF ELPDEELNPN LFNFQRYIVS KALRMGRYAI FADCGLGKTL 
MQLEWAHQVS KHTQKPVLIL CPLAVAYQTI SEGQKFGIKV EKYHDNEPLQ GVYISNYEQL
DNINTAQFVG VVLDESSILK NFTGKYKNAL IKAFKNTPYK LCCTATPSPN DLNEIGNHSE
FLNVLDAQDM RAKWFVRDEG MNNYRLKGHA TNDFYGWISS WATMLTKPSD IGFSAEGYEL
PKLNYIEKEI QTQKRDNGML FNPYSVSATE FQKELRNTLD QRIEAVAEIV NNSDEAFIVW
VNQNEEEKKV LELIPDAVAV NGSEKTEVKE KKLLGFANGE FRVLVTKKKI AQFGMNFQNC
HNQIFASLDF SFEGTYQAVR RSYRFGQTKE VNIYFITTDT MENVKQTRER KEQQFKEMQD
QMNKFINGNA FGLLNSYEFK EVKTPNYWLM KGDSCIEIKR IPDNSVDLII FSPPFSSLFT
YSNYIHDMGN NESHEDFFKQ YTFLLHDLYR ILKPGRLMVC HTKDLAVYKN SSGYTGLYDF
TGDHHRAVEA VGFKYHSKVN IWTDPVLEMQ RTKTQRLLYK QLRKDSSYTG VGLPEYCTIF
RKWEGNEEDW TPINNKNKEN FPLDVWQHWA SPTWNVEKGD IDHLHEVMED YKVNTWFDIK
RTDVLNGKKE ATDLGDEKHI APLQLSVIKR CVQMWSNKGE TVFTPFLGIG SEIYEAVTLE
RYGIGIELKD KYFETAVKNI NMVTEKQRQL TLF