Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0880 |
Symbol | |
ID | 8367299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1036085 |
End bp | 1038346 |
Gene Length | 2262 bp |
Protein Length | 753 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644983305 |
Product | DNA methylase N-4/N-6 domain protein |
Protein accession | YP_003140996 |
Protein GI | 256819717 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0863] DNA modification methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.842424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAGT ATCAAGAGTT TTTAAAATCA AAGGAACGAA AAGTAGCCGA AGCGGGTTTT GAACTTCCTG ATGAAGAATT AAACCCTAAC CTATTCAACT TTCAGCGTTA CATCGTGAGC AAAGCACTAA GAATGGGGCG GTATGCCATA TTCGCCGATT GCGGACTTGG AAAGACCTTA ATGCAATTGG AATGGGCACA CCAAGTAAGT AAGCACACAC AGAAGCCAGT GCTAATACTT TGCCCTCTGG CGGTAGCCTA TCAAACCATA TCAGAGGGGC AAAAGTTCGG TATTAAGGTA GAAAAGTATC ACGACAACGA ACCATTACAA GGCGTGTACA TCAGCAATTA CGAGCAGTTG GATAATATCA ATACTGCTCA ATTCGTAGGG GTAGTGCTTG ATGAGAGTTC AATATTAAAG AACTTCACCG GAAAGTATAA GAATGCCTTA ATTAAGGCTT TCAAAAACAC TCCTTACAAA TTGTGTTGTA CGGCAACTCC AAGCCCTAAT GACTTGAATG AGATAGGCAA CCACTCCGAG TTTCTTAATG TATTAGATGC TCAGGATATG CGGGCTAAGT GGTTCGTGCG TGATGAGGGA ATGAACAACT ACCGCCTTAA AGGACACGCC ACTAATGACT TCTATGGGTG GATTAGTTCG TGGGCAACTA TGCTTACAAA ACCCTCAGAT ATAGGATTTA GCGCTGAGGG CTATGAGTTG CCAAAACTAA ACTACATCGA AAAGGAAATA CAGACACAGA AGCGTGATAA TGGTATGCTT TTCAACCCTT ACTCGGTAAG TGCTACCGAG TTCCAAAAGG AATTACGCAA CACACTTGAC CAACGCATTG AAGCGGTAGC CGAGATTGTG AATAATTCCG ATGAGGCATT TATTGTTTGG GTAAATCAAA ATGAAGAGGA AAAGAAAGTA CTTGAACTCA TACCCGATGC GGTAGCGGTG AATGGTAGCG AAAAAACAGA GGTCAAAGAA AAGAAACTAC TCGGATTTGC TAATGGTGAA TTTAGGGTAT TGGTAACCAA GAAGAAAATA GCCCAGTTCG GTATGAATTT TCAGAATTGC CATAATCAAA TATTCGCAAG CCTTGACTTC TCATTCGAGG GCACATACCA AGCCGTAAGG AGGTCTTATC GCTTTGGACA AACAAAAGAA GTAAACATCT ATTTCATAAC CACTGACACA ATGGAAAATG TAAAACAAAC AAGAGAACGC AAAGAACAAC AATTTAAGGA AATGCAGGAC CAGATGAATA AATTCATAAA CGGTAACGCT TTCGGACTAC TCAATTCGTA TGAGTTTAAA GAAGTGAAAA CGCCTAATTA TTGGCTGATG AAAGGCGACA GTTGCATTGA GATTAAACGC ATTCCTGATA ACTCAGTAGA TTTAATCATA TTCAGCCCCC CGTTTAGTTC GTTATTCACC TACTCTAACT ACATTCACGA TATGGGGAAT AATGAAAGCC ACGAAGATTT CTTTAAGCAA TACACATTCC TTTTACACGA TTTGTATAGA ATATTGAAGC CTGGCAGGCT AATGGTTTGC CACACCAAAG ATTTGGCGGT ATATAAGAAT TCAAGCGGTT ATACCGGACT ATACGACTTC ACGGGAGACC ACCATAGAGC CGTTGAGGCG GTAGGATTTA AATATCACTC TAAGGTGAAT ATCTGGACCG ACCCAGTTTT GGAAATGCAA CGTACCAAAA CGCAACGACT TCTATACAAG CAACTGCGTA AGGATAGTAG TTACACGGGG GTAGGGCTAC CTGAATATTG CACTATATTT CGCAAGTGGG AAGGAAATGA GGAAGATTGG ACACCAATTA ACAACAAGAA TAAAGAGAAT TTTCCATTAG ATGTTTGGCA ACATTGGGCA TCGCCTACTT GGAATGTAGA GAAGGGAGAT ATTGACCATC TACACGAAGT AATGGAAGAT TACAAAGTAA ATACGTGGTT TGATATTAAG CGTACTGATG TACTCAACGG AAAGAAAGAG GCTACTGATT TAGGCGATGA AAAGCACATT GCACCGTTGC AATTATCAGT TATCAAGCGT TGTGTGCAGA TGTGGAGCAA TAAGGGAGAA ACTGTATTTA CACCATTCTT AGGAATAGGA AGTGAGATAT ACGAGGCAGT TACATTAGAA CGCTACGGTA TAGGCATAGA ACTCAAAGAT AAGTATTTTG AAACCGCCGT TAAGAATATT AATATGGTAA CCGAGAAGCA ACGACAATTA ACGTTATTCT AA
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Protein sequence | MNEYQEFLKS KERKVAEAGF ELPDEELNPN LFNFQRYIVS KALRMGRYAI FADCGLGKTL MQLEWAHQVS KHTQKPVLIL CPLAVAYQTI SEGQKFGIKV EKYHDNEPLQ GVYISNYEQL DNINTAQFVG VVLDESSILK NFTGKYKNAL IKAFKNTPYK LCCTATPSPN DLNEIGNHSE FLNVLDAQDM RAKWFVRDEG MNNYRLKGHA TNDFYGWISS WATMLTKPSD IGFSAEGYEL PKLNYIEKEI QTQKRDNGML FNPYSVSATE FQKELRNTLD QRIEAVAEIV NNSDEAFIVW VNQNEEEKKV LELIPDAVAV NGSEKTEVKE KKLLGFANGE FRVLVTKKKI AQFGMNFQNC HNQIFASLDF SFEGTYQAVR RSYRFGQTKE VNIYFITTDT MENVKQTRER KEQQFKEMQD QMNKFINGNA FGLLNSYEFK EVKTPNYWLM KGDSCIEIKR IPDNSVDLII FSPPFSSLFT YSNYIHDMGN NESHEDFFKQ YTFLLHDLYR ILKPGRLMVC HTKDLAVYKN SSGYTGLYDF TGDHHRAVEA VGFKYHSKVN IWTDPVLEMQ RTKTQRLLYK QLRKDSSYTG VGLPEYCTIF RKWEGNEEDW TPINNKNKEN FPLDVWQHWA SPTWNVEKGD IDHLHEVMED YKVNTWFDIK RTDVLNGKKE ATDLGDEKHI APLQLSVIKR CVQMWSNKGE TVFTPFLGIG SEIYEAVTLE RYGIGIELKD KYFETAVKNI NMVTEKQRQL TLF
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