Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0855 |
Symbol | |
ID | 8367274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1021147 |
End bp | 1022223 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644983281 |
Product | hypothetical protein |
Protein accession | YP_003140972 |
Protein GI | 256819693 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000196055 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAATA CGGCTTTTAA AGAGTTTCTT AAAGAAGCGG AAAGAAACAA GGAATACATC AAGAGAATAA AAGACTTGTT AGAAGAAGGA CAATTTGGAT TGCTTCCTTT GCAACAAATC TTTACCATTC GTGAGGGTAT TGTGAAAGGT ACTGAGTTTG GATACTATGC GCCAGTATCG AATGTAACTC ACTTAGACGA GGGTTGCGGT AAGCCTTCTA AGCCACTTGA TACACAAGTG CGCACTGGCT GGTTTGACCC TGTGCCATTA AAGGTGATTG TTTCCGATTG TTATTCAACA TTGGAAAAGA CATTCGACGC TTGGGTGGCT AAAACAGGAG CAGACCGTTT TAACATTGAC GATTCAGATT ATGTGGCGTT TTTGGTTTCA CTAATCGAGG GTGGTATTTT GAACGACTTT AACAGATTCG TGTTCTTTGC AGACAAGAAC CATTCGACAG TAGGAAGTGG AAGTGGTACA CAAGTGCTTA AAGCGGGCTT GGACAAGGCT AACTTTAATG TGCTTAACGG ATTGTTTTCT CAGTTTGAAG CAATGGTAGC AACTGCGCCC GAGAGAAAGA TTACTATTGA TGAGAATGCA CAGGCAAATT ATGCTGGACA GCGTGCTCTT GCAGATGATA GAGCATACAA AGTTCTCTGT CAATTGAAAG ATATTGCAGG ATTTAAGTCA GGAGCTTCAC CTGTGTTTGT AATTACACAG AGCTTAGCAA CCAACTTAAC ACGTTTTATG CGTAAAGAGT TCCGCAATGA GCAATCGTTT AAAATGGTTG AGGGCGGTTA TATGGTGTCA GAGTTCGAAG GTGTACCTGT GGTTACCTCT GAATGGTTAG ATGATATGAT ACGCTCTAAC TTTGACGACG GCACTAAGTG GCACAATCCA CACCGAGCCT TGTTACTTGA TAAGAATGAG TGCCAAATTG CTATTGATAG TATGGGAGCG CTGAAAGATA TAGGAGTTGA GTACTTAGGC GGTAAGTTTG AAGAAGTTTA CTTGAAGGCT TCTTATCGTG CAGACTTCCA ACGTGTGATT GGCAATACCG GAGCAATGGC GATTTAG
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Protein sequence | MANTAFKEFL KEAERNKEYI KRIKDLLEEG QFGLLPLQQI FTIREGIVKG TEFGYYAPVS NVTHLDEGCG KPSKPLDTQV RTGWFDPVPL KVIVSDCYST LEKTFDAWVA KTGADRFNID DSDYVAFLVS LIEGGILNDF NRFVFFADKN HSTVGSGSGT QVLKAGLDKA NFNVLNGLFS QFEAMVATAP ERKITIDENA QANYAGQRAL ADDRAYKVLC QLKDIAGFKS GASPVFVITQ SLATNLTRFM RKEFRNEQSF KMVEGGYMVS EFEGVPVVTS EWLDDMIRSN FDDGTKWHNP HRALLLDKNE CQIAIDSMGA LKDIGVEYLG GKFEEVYLKA SYRADFQRVI GNTGAMAI
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