| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0849 |
|---|
| Symbol | |
|---|
| ID | 8367268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 1015558 |
|---|
| End bp | 1016850 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644983275 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003140966 |
|---|
| Protein GI | 256819687 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACACC AAAATCAACA AAACAAAAGT TACGCATTAC CCATTGCGAT GATGTTCGCC
TTATTCTTTA TGATATCATT CGTAACGGGC TTACAAAACC CTTTCGGGGT AATTGTAAAA
AACCAATTTA TGGCAAGCAA CCTCGAATCA CAATTGGGGA ACCTAGCCAA CTTTATCGCT
TATGCCTTTA TGGGGATTCC CGCAGGACTA ATGCTACAAC GCATCGGTTA TAAGAAAACT
GCTTTAACAG CTATTGCCGT AGGCTTCGTT GGCGTTTGTA TTACTTTCCT TTCAGGTAAT
ATGGGTAGCT TTGGAGTATA CCTCACTGGG GCATTTATCT CAGGCTTCTC TATGTGTATG
CTGAACGTGG TAGTAAACCC AATGCTCAAC ACCCTCGGTG GTGGTGGCAA ACGCGGTAAC
CAACTCTTGC AATTCGGAGG CGCTATCAAC TCTATCGGGG CAACTATCGT GCCCGTATTA
GTAGGGTACC TCATTGGTAC TATCAGTGCC GGTACTTCTA TTGCCGATGC CAACCCTGCC
CTCTTCTTAG CAATGGGTAT CTTCGCTTTG GCATTTATTG TACTTGCCCT AATTCAAATA
CCCGAACCTC ACGCAGCGGT AAAACAAAAA GATGTAACCG ATAAACACAG TCCACTATCT
TTCCGCCACT TTATATTAGG AGCGATAGCT ATCTTCCTTT ACGTAGGGAT TGAAGTAGGA
ATTCCCAACA TTGCAAACCT TTTTATGACC AGTAGTCCAG AAATGAACGG CTTAGCAATA
GATACCACTA TTGCAGGTTC AGTAGTAGGT ACCTATTGGT TCCTGATGTT CATCGGTCGT
CTTACCGGAG GTTCATTAGG AGCGAAGTTT TCAAGCAAAG GAATGCTTAC TTTTGTATCT
TCCTTAGGAA TTCTTTTTGT TATCTTAGCT ATATTAATAC CCGAAACACA AATGGTAAAT
ATGCCTGTGT TCAAATCTGA TATTTCTTTT GGGTTAGCCG AAGTGCCAAT AAGCATAATG
TTCCTCATTC TTTGTGGCTT GTGTACCTCA GTAATGTGGG GAGGTATTTT TAACCTCGCT
ACCGAAGGTT TGGGTAAATA TACAGCCGCT GCCTCAGGTA TCTTTATGGC GATGGTATGC
GGGGGTGGTA TTTTGCCAGC TATCCAAGGT TGGGCTGCCG ATGCTTTTGG TTATATCCAA
AGTTACTGGG TAATCGTATT AGCATTGCTA TTCCTCTTGT ATTATGCCCT CGTAGGTAGT
AAAAATGTAA ATACCGATAT CAACGTAGAT TAA
|
|---|
| Protein sequence | MEHQNQQNKS YALPIAMMFA LFFMISFVTG LQNPFGVIVK NQFMASNLES QLGNLANFIA
YAFMGIPAGL MLQRIGYKKT ALTAIAVGFV GVCITFLSGN MGSFGVYLTG AFISGFSMCM
LNVVVNPMLN TLGGGGKRGN QLLQFGGAIN SIGATIVPVL VGYLIGTISA GTSIADANPA
LFLAMGIFAL AFIVLALIQI PEPHAAVKQK DVTDKHSPLS FRHFILGAIA IFLYVGIEVG
IPNIANLFMT SSPEMNGLAI DTTIAGSVVG TYWFLMFIGR LTGGSLGAKF SSKGMLTFVS
SLGILFVILA ILIPETQMVN MPVFKSDISF GLAEVPISIM FLILCGLCTS VMWGGIFNLA
TEGLGKYTAA ASGIFMAMVC GGGILPAIQG WAADAFGYIQ SYWVIVLALL FLLYYALVGS
KNVNTDINVD
|
|---|
| |