| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0847 |
|---|
| Symbol | |
|---|
| ID | 8367266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 1013108 |
|---|
| End bp | 1014325 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644983273 |
|---|
| Product | Beta-ketoacyl synthase |
|---|
| Protein accession | YP_003140964 |
|---|
| Protein GI | 256819685 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTAG TTATCACCGG AATGGGTATT TATTCCTGTA TAGGCACTTC ACTGGGCGAA
GTGCGCGATT CGTTATACCA AGGTAAATCG GGTATTGTTT TTTTGCTCGA GCGCAAAGAA
TACGGCTATC GGTCGGCGCT GACGGGCTTT GTAGAAAACC CCGACCTAAA AGGACTCTTA
GGTCGTCGCG AGCGTATTTC TATGGGGCAA GAAAGCGAAT TTGCCTATAT GGCAACGCTC
GAAGCGCTTA AAAATGCCGG TATCGATAGC GATTTCTTAC AACAAAACGA AGTGGGAATC
CTCTACGGCA ACGACAGTGT AGCCGAGTCG GTAATTCTTA CAAACGATAA GATAAGAGAG
AAGAAAGATA CTACTCTCGT AGGCTCTGGG GCGGTGTTCC GTACGATGAA CTCTACCGTA
ACGATGAACC TCTCAACTCT CTTCCAATTG CGAGGGGTAA ATATGAGTAT CAGCGCAGCT
TGTGCCAGTG GGTCGCATTC GGTAGGCTTA GGCTACTTGC TTATCCAAAG CGGTATGCAA
GACTGCGTAA TATGTGGCGG AGCTCAGGAA ATCAACAAGT ATAGTATGGG CAGTTTCGAT
GGTCTTGGGG TCTTCTCAAT GCGTGAGGAC GAACCCACTT TGGCTTCTCG TCCCTTCGAT
ACCGGTAGAG ACGGCTTAGT ACCCAGTGGA GGGGCAGCTA CTTTGGTGTT GGAGAGTTAC
GAGTCGGCGA TGAGGCGTGG GGCAACCCCA ATTGCTGAGG TGGTAGGCTA CGGCTTTTCG
TCTAATGGCG GACATATCTC TACACCCAAT GTAGAAGGTC CTGCCCGTGC TATGGCACGC
GCCCTCAAAA ATGCAGGAAT ACAAGCCAGT GAAATCGACT ATATCAATGC GCACGCCACT
TCTACCCCCA TAGGCGATAC CAACGAAGCA AAGGCAATTT ATGAGATTTT TGGCAGTAAT
ATTCCTGTGA GTTCTACCAA ATCAATGACC GGACACGAGT GCTGGATGGC AGGAGCCAGT
GAAGTGATAT ACTCAGTGCT GATGATGCAA AACAGTTTTA TAGCTCCTAA TATCAATTTT
GAAACCCCCG ATGAAGCTTC TGCCAAGCTA AATATTATTC CCGAAACTGT AGAACGCCCT
ATTAAAGCCT TTTTGAGCAA CTCTTTTGGC TTCGGAGGTA CTAACTCAGC GTTGGTAGTA
AAAGCGTTTA TTTCTTAA
|
|---|
| Protein sequence | MRVVITGMGI YSCIGTSLGE VRDSLYQGKS GIVFLLERKE YGYRSALTGF VENPDLKGLL
GRRERISMGQ ESEFAYMATL EALKNAGIDS DFLQQNEVGI LYGNDSVAES VILTNDKIRE
KKDTTLVGSG AVFRTMNSTV TMNLSTLFQL RGVNMSISAA CASGSHSVGL GYLLIQSGMQ
DCVICGGAQE INKYSMGSFD GLGVFSMRED EPTLASRPFD TGRDGLVPSG GAATLVLESY
ESAMRRGATP IAEVVGYGFS SNGGHISTPN VEGPARAMAR ALKNAGIQAS EIDYINAHAT
STPIGDTNEA KAIYEIFGSN IPVSSTKSMT GHECWMAGAS EVIYSVLMMQ NSFIAPNINF
ETPDEASAKL NIIPETVERP IKAFLSNSFG FGGTNSALVV KAFIS
|
|---|
| |