Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0845 |
Symbol | |
ID | 8367264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1008211 |
End bp | 1010433 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644983271 |
Product | oxidoreductase FAD/NAD(P)-binding domain protein |
Protein accession | YP_003140962 |
Protein GI | 256819683 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATT ACAACAGTAT TATTATAGGT AGTGGCTTGG GCGGACTCAT CGCTGGAGCT ACTTTGGCTC TCTGGGGCAA GAAGGTAATT GTGCTCGAAC AACACTATAT CGCAGGTGGT TGTGCTACTG CTTTCAAACG TAAAGATTAC CTAATGGAAG TAGGTTTGCA CGAAATCGAC GGATTGAACG AAACTGACCC TAAACGTCCT ATCTTAGAAC TTTTAGGGGT GTTTGAGGAA GTAGAATTTC TAAAAGTACC CGAATTCTAC CATTTGAAGA AGCAAAACTT CCAGTGTACT CTTCATCACG GGGCAGAAGC CAAAGCAAAA CTCATCGCCG ATTTTCCCGA TAGTAAAGTC GAAATAGAAC GCTTTTTTGA ACTCATCAAT AGGCTTTACA CCGAAATGCG CCGACTCCCC CGTAGCAAAT GGCTCAATAT ATTGCTCTAC CCGCTGATGC CTTTCTTGAT TCCTACCATC ATCAAAACTT CTACAATGAA TGTGGGTAAA TGGCTCGATG CAAATATCAA AAATGAAGCA CTCAAAAACG TACTCACGGC TAATTTGGGT TATTATACCG ATGACCCTTA TAACCTCTCG CTGATGTACT TCCTGATGGC GCAAGGTAGC TATTTAAACG GAGGAGGCAA CTTCGTAAAA GGGGGTTCAC AGTCGCTGTC TAACTACTTG GTGCGCTTTA TCGAAAAACG TGGCGGACAA GTGCTTACGG GTAAATTCGT AGAAGAGATT TTAGTGGAAA ACAACCAAGC AGTGGGGGTG AGCTATCGCG ATACGTTCAA CACTTCGGCG GCTAAGCAAT CGCTCTATGC CGATACCGTG GTCGCCAATG CCGCCCAACC TATTGTAGCT CAAATGCTCC CCGAGCCTTA TCGCTCTAAA TTAGCGCAAA AGGTAGCGCC TTTAGAACTC GCCTGCTCAC TGCTCACCAT CTATTTGGGC TTCAATACCG ATTTGAAAAA ACTCGGCGTA AACCACTATT CTACCATCAT TCAAGGTCAA AAAGATTATA AACTGAAAGA TGTAAAAGCC GATTCGCAGG GCGATTGGGC TCAAAAATCA TTTACTTTTG TGAATTACGG AAGGATAGAT GCTCAGTTAG CTCCTGAGGG GAAGACGGTA GCCGTGATTT GTGCCGTGGA TTACCTCAAA GAATGGGAAG GACTCAGCGA AGCGGAATAT CAACAGAAGA AGGAAAGGGT CGCACAGCTG TTTTTAACCC GTTTAGAAGC CGAATTTCCT ACTATTCTCG AATACTTGGA GTGTTATGAG GTAGCCACTG CCAAAACCAT AAAAAGATAC ACTTTAAATC CGCAGGGCAC TCCGTATGGC TATGTGCAAT CGGTGAAACA AACCTACCCT AAACGCGATA AACTCACCGC TTCACCGCTG AAAAACTTGT ACTTTGCCTC AGCTTGGGCG CCTTCGGGGG GTGGCTATTC AGGGGCGATT TACAGCGGTT TTATGACGGC AAGCAAGATG AAAACCCAAG TGAAATGGCA CAACTACCCA CCCTCAACTC TCGCCGATGA ACGCTGTGTA AAACTCTTAG CAAAAGAATT TATCGCCCAT AATACTATCT TGCTCACTTT TGAAAAACCT AAAGATTTGC AGTATAAAGC AGGACAGTAT GCCGTATTGA GGCTCAACAA CCCTCGTTAT ACCGAATTGG ATATGCCTTT GCGCCCGCTC TCAATGGTCT CTCATCCTGA TGAAGATACT TTGCAGTTTG CAATGCGCCT CAGCGATAGC AGTTTTAAGA AAAGTGTTGT CGAAATGGCG ATAGGTGATA CAGCCACGAT ATTCGCTCCT ATGGGTAATT TCACTCTTAA AGGAAAAAAT AAGCGCATTG TGTTCCTCGC CTCAGGCATT GGCATTACCC CCGTACTCCC GATGCTCAAA ACATTAGAAC AACAGCAATT TGCAGGTGAA GTAGTAGTAT TTTACTCCAA TAAAACCGAA GCCTCAGCTG CTTTTCACAA CGATTTACAG CATAGCACTT TGGCTAACTA TACCTATCTG CCTGTGTTCA CCGCCACCCA AAAGCGCCTC AATACCGATT TTTTAAAGGA GCATCTCCAC ACCCTCACCG ATTGTGACTA TTACATCGTG GGAACCAATA GCTTTACCAA AGCAATGCAA GAGCTCTTGT TAAAAGAAAA CGTACCCGCC ACAACCATCT TTAAAGACGA TTTCGGAGGG TAA
|
Protein sequence | MKNYNSIIIG SGLGGLIAGA TLALWGKKVI VLEQHYIAGG CATAFKRKDY LMEVGLHEID GLNETDPKRP ILELLGVFEE VEFLKVPEFY HLKKQNFQCT LHHGAEAKAK LIADFPDSKV EIERFFELIN RLYTEMRRLP RSKWLNILLY PLMPFLIPTI IKTSTMNVGK WLDANIKNEA LKNVLTANLG YYTDDPYNLS LMYFLMAQGS YLNGGGNFVK GGSQSLSNYL VRFIEKRGGQ VLTGKFVEEI LVENNQAVGV SYRDTFNTSA AKQSLYADTV VANAAQPIVA QMLPEPYRSK LAQKVAPLEL ACSLLTIYLG FNTDLKKLGV NHYSTIIQGQ KDYKLKDVKA DSQGDWAQKS FTFVNYGRID AQLAPEGKTV AVICAVDYLK EWEGLSEAEY QQKKERVAQL FLTRLEAEFP TILEYLECYE VATAKTIKRY TLNPQGTPYG YVQSVKQTYP KRDKLTASPL KNLYFASAWA PSGGGYSGAI YSGFMTASKM KTQVKWHNYP PSTLADERCV KLLAKEFIAH NTILLTFEKP KDLQYKAGQY AVLRLNNPRY TELDMPLRPL SMVSHPDEDT LQFAMRLSDS SFKKSVVEMA IGDTATIFAP MGNFTLKGKN KRIVFLASGI GITPVLPMLK TLEQQQFAGE VVVFYSNKTE ASAAFHNDLQ HSTLANYTYL PVFTATQKRL NTDFLKEHLH TLTDCDYYIV GTNSFTKAMQ ELLLKENVPA TTIFKDDFGG
|
| |