Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0839 |
Symbol | |
ID | 8367258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1000368 |
End bp | 1002500 |
Gene Length | 2133 bp |
Protein Length | 710 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644983265 |
Product | maltose phosphorylase |
Protein accession | YP_003140956 |
Protein GI | 256819677 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0771265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACACGT GGAACATTAT CGTAGAGGGC TTTAATAAAG CTGAGGTTAC CAAACACGAA AGTATTTTCA GCCTTGGAAA TGGGGCTATG GGAATGCGCG CTAACTTTGA AGAGGACTAT ACGGGCGATA CACTTCAAGG GAGCTACATC GGTGGGGTGT ATTACCCCGA TAAAACCCGA GTGGGCTGGT GGAAAAACGG CTATCCTGAG TACTTTGCCA AAGTGCTCAA TGCGCCCAGC TGGATAGGAC TGCACATCAA AATAGACGGG GAACTATTAG ACTTAAATAC TTGTTTGGAG GTAAAAAACT TCCGCCGACA ACTGAATATG AAAGAGGGTT GGTACGAACG AAGGTTTACG GCTACGCTTC CTAACGGTGT GGAAATTGCT GTAAAAGTAG TGCGTTTGCT CTCGTTGCGT TATGATGAAA TAGGAGCTTT ACGTTATGAG ATTAGTCCTC TTAATGCTGA TACTTCCATA GAAATAGAAA GTTACTTAGA CAGTGGTATT AAGAATAATG ATGCTAACTG GGACGAGCTT TTTTGGAATA CTTTGGAAAT TTCTTCGGAA AACAACTGCG CTACTATACT TGCTGAAACT AAAAAGACAG CCTTTAAAGT GCAAACCTTT ATGGAAAATC ATCTTTTTAT AGAAGGAAAA GAACTGAATA TCAGTGAAAA AGAAAATAGA AAGGAGAACT ATATAGGGTT GCAGTATGAA GTAACTGTTA AGCAAAACCA AACCTTTCGT ATTGAAAAAT ATGGTGGCTA TACACCTTTG ACAAAGTCTA AAACTTTGTC AAAGGTGCGA GACGCACAGG CATTAACATT TGAGGGGTTA TTGGAGATGC AGAAAGAAGA TTGGGCGGCG ATATGGGAAA CATCGGATAT TGTGATTGAA GGTGATGAGA AAGCACAACA AGGTATCCGG TTTAATATTT TTCAGCTCAA CCAAACGTAT CAGGGCAAGT ATGCCCATTT GAACATAGGA CCTAAGGGTT TTACGGGGGA AAAGTACGGT GGTAGTACCT ATTGGGATAC TGAGGCTTAT TGCCTGCCTT TTTATATGGC TACCAAAGGC GCGGAAGTAG CTCGCAATTT GCTGTTGTAC CGCTATAAAC AGTTGCCACA AGCTATTGAA AACGCCCAAA AACTCGGTTT TACTGGCGGG GCTGCACTCT ACCCTATGGT AACAATGAAC GGTGAAGAGT GCCATAATGA ATGGGAAATT ACCTTTGAAG AAATACACCG CAACGGGGCG ATTGCTTTTG CAATTTATAA CTATACACGC TATACGGGCG ATGAGTCGTA CCTGAAAGAA TATGGAATGG AAGTGCTTAT TGCTATCGCA CGTTTTTGGG CACAGAGAGT CAATTTTTCA GAAGAAAAGA AACAGTACGT AATCTTAGGA GTGACAGGAC CTAATGAGTA CGAAAACAAT GTGAACAATA ATTTCTATAC GAACTATCTC GCCTCTTGGT GTTTGAGTTA TGCAGCGACT ATGGCACTGA AATACAAGAG CGAAAAGCAA TGGGTGACTA TTAAAGAATT GAAGGAGTGG AGTGATATTG TGGAACATAT GTACTTGCCT TATAGCGAAA AGTATGATGT ATACTTGCAA CAAGACGGTT TTTTGGATAA AGACCTCAAG CCTGTGAGTG CCATTCCTAC TGGGGAGCGC CCGCTCAACC AACATTGGTC GTGGGATAGG ATATTGCGTT CGCCTTATAT CAAACAGGCA GATACGTTAC AGGGATTTTA TTTCTTTGAA GAGCGATTTA CCAAAGAACA ACTTCAAAAG CACTATGAGT TTTATGAGCC TTTCACCGTA CACGAGTCGT CACTCTCACC TTGTGTGCAT AGTGTCCTCG CATCAGCCTT AGGGAAGACA GAGGAAGCCT ACGCGCTCTA CCTGCGTACA GCTCGGCTTG ATTTGGACGA CTACAACAAG GAGGTACACG AAGGGTTACA CATCACCTCG ATGGCGGGCA CGTGGCTCAG CATTGTAGAG GGCTTTGCTG GTATGCGTGT AAAGAACGGT GCACTAACGT TTACGCCTCG CTTGCCTAAA CAATGGAAGC GTTTATCGTT TAAAGTGATA TTTAGAGGAG AAGTAAAAGA AGTGATTATT TAA
|
Protein sequence | MNTWNIIVEG FNKAEVTKHE SIFSLGNGAM GMRANFEEDY TGDTLQGSYI GGVYYPDKTR VGWWKNGYPE YFAKVLNAPS WIGLHIKIDG ELLDLNTCLE VKNFRRQLNM KEGWYERRFT ATLPNGVEIA VKVVRLLSLR YDEIGALRYE ISPLNADTSI EIESYLDSGI KNNDANWDEL FWNTLEISSE NNCATILAET KKTAFKVQTF MENHLFIEGK ELNISEKENR KENYIGLQYE VTVKQNQTFR IEKYGGYTPL TKSKTLSKVR DAQALTFEGL LEMQKEDWAA IWETSDIVIE GDEKAQQGIR FNIFQLNQTY QGKYAHLNIG PKGFTGEKYG GSTYWDTEAY CLPFYMATKG AEVARNLLLY RYKQLPQAIE NAQKLGFTGG AALYPMVTMN GEECHNEWEI TFEEIHRNGA IAFAIYNYTR YTGDESYLKE YGMEVLIAIA RFWAQRVNFS EEKKQYVILG VTGPNEYENN VNNNFYTNYL ASWCLSYAAT MALKYKSEKQ WVTIKELKEW SDIVEHMYLP YSEKYDVYLQ QDGFLDKDLK PVSAIPTGER PLNQHWSWDR ILRSPYIKQA DTLQGFYFFE ERFTKEQLQK HYEFYEPFTV HESSLSPCVH SVLASALGKT EEAYALYLRT ARLDLDDYNK EVHEGLHITS MAGTWLSIVE GFAGMRVKNG ALTFTPRLPK QWKRLSFKVI FRGEVKEVII
|
| |