| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0827 |
|---|
| Symbol | |
|---|
| ID | 8367246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 990019 |
|---|
| End bp | 990492 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644983253 |
|---|
| Product | SCP-like extracellular |
|---|
| Protein accession | YP_003140944 |
|---|
| Protein GI | 256819665 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.274249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TATTCTTTTT ATTCTTAGCA CTCCTATCGT TACAGTGTAG TAAATCACAA
GATAGTGAGA CCACAGGTTT GAACTCTGAC AAGATGCTCA CCCTTATCAA TCAGCAACGA
CAAAAAGGCT GCAATTGTGG TAGTAATTAT TTTAAACCCG TACCTCCTGT AAAGTGGAAT
AAAACAATAG GAAAAGTAGC CAAAGCCCAT AGTGACGATA TGCTTAAACG CAACGTATTA
ACTCACTATA GTAAAAACGG ACAAGATCCT GGTGGGAGAC TTATTAACGC TGGTTATGAA
TGGGCTACGT GGACTGAAAA TGTAGCTATG GGACAACAAA ATGAAGAAGA AGCAATGAAA
AGTTGGCTCG AAAGTCCAGG ACATTGCGCT AATATTATGA ATGCCCAAGT TACCGAAGTA
GGTGCTGGTC GTAGCGGTAA GTATTGGACG CAACTCTTTG CCGCACCCAA ATAA
|
|---|
| Protein sequence | MKKLFFLFLA LLSLQCSKSQ DSETTGLNSD KMLTLINQQR QKGCNCGSNY FKPVPPVKWN
KTIGKVAKAH SDDMLKRNVL THYSKNGQDP GGRLINAGYE WATWTENVAM GQQNEEEAMK
SWLESPGHCA NIMNAQVTEV GAGRSGKYWT QLFAAPK
|
|---|
| |