Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0826 |
Symbol | |
ID | 8367244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 989003 |
End bp | 989728 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644983252 |
Product | heat shock protein DnaJ domain protein |
Protein accession | YP_003140943 |
Protein GI | 256819664 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000315568 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTAT TCTCTATTCT TATATTTCTT TTTTTCTTTT GGCTTTTTAG ACAACTTTCC CAACAGCTAC CCACCGAACA GCCCTTTCGC AACCCATTTC AGCAAAATAT ATCACCCGCT ACATTCGAGC TGAATCTCCT CTCACTTTGT AGCCTAGTTA TCAAAGCCAA CGGACGTGTT ACCCAAGCCG AATTAGATTT CGTGCGTTTG CAGTTTGTGC GTCTTTATGG TAAAGAACGC GCTAATGCCG TGTTTCGCAG TTTTAATGAA CTAATAAAAG GACGCCAGAT AGAAGCTCCC CGAGTAGCAA TGTACGTACG AGCGCGTACT ACCTACGAAA CACGCTTGCA AATCCTCTAT TTTCTCTTTG GTATTGCTCA AGCCGATGGA GTAGTAAGCC AAGACGAAGT ACAACAAATA GAGCAAATAG CCTATTACTT CCAGATAGAA AAAAGTGATT TTATAAGTAT CAAAGCAATG TTTGCTAACA CTTATGGTAG TAATAGCTAT ACCCAAACTC CCAATGAAAA TGCTTATGCT ATTTTAGGTA TAAGCCCCCA AGCTACTGAT GCCGAAGTAA AACAAGCTTA CAGAAATATG GCAAAAAAAT ATCACCCCGA TAGAGTGATT ACAGAAGATG AAGCCATAAA AAAAGGCGCC GAAGAAAAGT TCAAACAAGT ACAACAAGCC TATGAACAAA TCGCACGCCA AAGAGGAATG AACTAA
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Protein sequence | MSLFSILIFL FFFWLFRQLS QQLPTEQPFR NPFQQNISPA TFELNLLSLC SLVIKANGRV TQAELDFVRL QFVRLYGKER ANAVFRSFNE LIKGRQIEAP RVAMYVRART TYETRLQILY FLFGIAQADG VVSQDEVQQI EQIAYYFQIE KSDFISIKAM FANTYGSNSY TQTPNENAYA ILGISPQATD AEVKQAYRNM AKKYHPDRVI TEDEAIKKGA EEKFKQVQQA YEQIARQRGM N
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