Gene Coch_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0826 
Symbol 
ID8367244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp989003 
End bp989728 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content40% 
IMG OID644983252 
Productheat shock protein DnaJ domain protein 
Protein accessionYP_003140943 
Protein GI256819664 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000315568 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTAT TCTCTATTCT TATATTTCTT TTTTTCTTTT GGCTTTTTAG ACAACTTTCC 
CAACAGCTAC CCACCGAACA GCCCTTTCGC AACCCATTTC AGCAAAATAT ATCACCCGCT
ACATTCGAGC TGAATCTCCT CTCACTTTGT AGCCTAGTTA TCAAAGCCAA CGGACGTGTT
ACCCAAGCCG AATTAGATTT CGTGCGTTTG CAGTTTGTGC GTCTTTATGG TAAAGAACGC
GCTAATGCCG TGTTTCGCAG TTTTAATGAA CTAATAAAAG GACGCCAGAT AGAAGCTCCC
CGAGTAGCAA TGTACGTACG AGCGCGTACT ACCTACGAAA CACGCTTGCA AATCCTCTAT
TTTCTCTTTG GTATTGCTCA AGCCGATGGA GTAGTAAGCC AAGACGAAGT ACAACAAATA
GAGCAAATAG CCTATTACTT CCAGATAGAA AAAAGTGATT TTATAAGTAT CAAAGCAATG
TTTGCTAACA CTTATGGTAG TAATAGCTAT ACCCAAACTC CCAATGAAAA TGCTTATGCT
ATTTTAGGTA TAAGCCCCCA AGCTACTGAT GCCGAAGTAA AACAAGCTTA CAGAAATATG
GCAAAAAAAT ATCACCCCGA TAGAGTGATT ACAGAAGATG AAGCCATAAA AAAAGGCGCC
GAAGAAAAGT TCAAACAAGT ACAACAAGCC TATGAACAAA TCGCACGCCA AAGAGGAATG
AACTAA
 
Protein sequence
MSLFSILIFL FFFWLFRQLS QQLPTEQPFR NPFQQNISPA TFELNLLSLC SLVIKANGRV 
TQAELDFVRL QFVRLYGKER ANAVFRSFNE LIKGRQIEAP RVAMYVRART TYETRLQILY
FLFGIAQADG VVSQDEVQQI EQIAYYFQIE KSDFISIKAM FANTYGSNSY TQTPNENAYA
ILGISPQATD AEVKQAYRNM AKKYHPDRVI TEDEAIKKGA EEKFKQVQQA YEQIARQRGM
N