Gene Coch_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0821 
Symbol 
ID8367239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp983750 
End bp984901 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content29% 
IMG OID644983247 
Producthypothetical protein 
Protein accessionYP_003140938 
Protein GI256819659 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.646249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCAT TTGCTAAAAT AGATAAAGAA AAGAATGGTG ATTACTTGAA ATTACTTTCT 
GCGGTTTCTA AGTTATCAGG ACTTTTCAGT GAAAGTATAA TTCCCTATAT TAATTATAGG
GTAGTTGAAA ATGTTTTTTG TAAAAGTTTT GATGCTGAAA ATCTTTCTCG TTCAGACACT
GCTTTTGATG CAAATTACGA ATCTATTGGA GTAGGATTAA AAACATTTAC TTGTCCTTCA
AATAGTAGTA TAGAAAAAGT GGCTGAATTT AATTCTTTAT CAACAATATT AAAACCTTTG
AAAGGAAAAG AATTAGCACT AAAACTTGCA AAATTTCGTA ATGAAAGAAT AGATTTAGCC
AATAGACTTT ATAACATTAA TAACTCACTA TATCATATAG TAGCGAGACG AGAAAAGGAA
TTAATTCTGT TTGAGACAGA CTACGATAAG ATAGATATAA ATAATATTCA TTCTATAAAA
GATACCAAGG CAAGTCTACA ATTTGATGAT GGTAAAAATC AGTATAATTT TAATTACTCG
AAAAGTACTC TTTTTAGGAA ATTTTATATT CCGCAAAATG CTTTTCATTT GCCAGTAGAA
ATTATAGAAG ACCCTTATCA ATTACTTTTA GAATTATTTG GAGATAAAGT TTTTAAACCT
GCTAAAGATA AATTAATTAA AGGTATAAAC TATGTGATAC TTCCTTTGTA CGGCAGAAAG
CAAAAGAGAA AGTATGTCTT TGAGAAAAGT GGACTCAATC AGTGGAATGC TGGAGGGAGA
AAAAGAGATT TAGGAGAAAT ATATATCCCT ATACCAATTG AAATTCATAA ACAGTTTCCT
AATTTCTTTC CTAAAAGAGA TGTACAGTTT AAACTTAAAG TCCCCACAGG AGAGATTCTC
AGTGCAAAAG TTTGCCAAGA TAACTCAAAA GCATTAATGA CAAATCCTAA TAAAGCTCTT
TCAGATTGGT TATTAAGAAA AGTTTTTCAA GTAAAAGAAG GAGAACTTTT AACTATTCAG
AAGATGAATG AATTAGGATT TGATAGTATT ATCATTATTA AGGAAGACGA AGAGAATTAC
AAAATAGATA AAGCGAGACT TGATAGTTAT GAAGTTTTTA TCAATGGGAG CTCTGTCGAA
AATGAAGAAT AA
 
Protein sequence
MKSFAKIDKE KNGDYLKLLS AVSKLSGLFS ESIIPYINYR VVENVFCKSF DAENLSRSDT 
AFDANYESIG VGLKTFTCPS NSSIEKVAEF NSLSTILKPL KGKELALKLA KFRNERIDLA
NRLYNINNSL YHIVARREKE LILFETDYDK IDINNIHSIK DTKASLQFDD GKNQYNFNYS
KSTLFRKFYI PQNAFHLPVE IIEDPYQLLL ELFGDKVFKP AKDKLIKGIN YVILPLYGRK
QKRKYVFEKS GLNQWNAGGR KRDLGEIYIP IPIEIHKQFP NFFPKRDVQF KLKVPTGEIL
SAKVCQDNSK ALMTNPNKAL SDWLLRKVFQ VKEGELLTIQ KMNELGFDSI IIIKEDEENY
KIDKARLDSY EVFINGSSVE NEE