| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0810 |
|---|
| Symbol | |
|---|
| ID | 8367228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 970894 |
|---|
| End bp | 973020 |
|---|
| Gene Length | 2127 bp |
|---|
| Protein Length | 708 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644983236 |
|---|
| Product | peptidase S9A prolyl oligopeptidase domain protein beta-propeller |
|---|
| Protein accession | YP_003140927 |
|---|
| Protein GI | 256819648 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1505] Serine proteases of the peptidase family S9A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATT CCTTATTCTC CGCAACGCTA CTTCTTTTAG TAGCCTGCAA CCAAAACCCT
AACAACACTA ACGACGAAAA GATGAACTAT CCTCAAACAC GTATGGATAA TACCGTTGAT
ACTTACTTCG GCACTCAGGT GGCTGACCCT TACCGTTGGC TTGAAGACGA CCGTTCTGCT
GAAACCGCTC AGTGGGTAAA AGTGCAAAAC GATTTTACGT TTGGTTATCT CTCTAAAATA
CCTTATCGAC AAGCAATAAA AGAGAAACTC GAAAAACTTT GGAATTATGA GAAACTGAGC
GCTCCTTTTA CCGAAGGCGA TTATACCTAT TATTACAAGA ACGATGGCTT ACAAAACCAA
TCGGTGCTCT ATCGCAAAGA TAAAGAAGGC AAAGAAGAAA TTTTCTTAAA TCCGAATACT
TTTTCTAAGG ATGGAACAAC TTCATTAGGA GACGTCGCTT TCTCCGAAGA TGGTTCGTTA
GTAGCTTATC TCATTTCAGA AGGCGGTAGC GACTGGAGAA AAGGGATAGT GCTCGATGCG
AAAACTAAAA AGGCAATAGG TGATACCTTA GTAGATATAA AATTTAGTAG TATAGCGTGG
AAGGGCAATG AAGGCTTCTT CTATTCCAGC TACGACAAAC CCAAAGGCAG TGAGCTATCA
GCAAAAACCG ACCAGCACAA ACTTTATTAT CACAAACTCG GCACATCTCA AAAGAGTGAT
AAGCTCATTT TTGGTGGTAC ACCAGCTGAG AAATATCGTT ATGTGTCGGG CACAGTATCC
AATGACGGGA AATATCTGTT CATTTCGGTT GCCAATGCGA CCTCAGGTAA TAAACTATTT
GTAAAAGATT TATCAAATCC TAAATCTTCT TTGGTAACTA TTACCAACAA CTTCGATGGA
GATACAGGAT TTGTAAATAA CCAAGGCACA ACGCTCTTTT TAGAAACCAA TATCAATGCG
CCTAACGGTC GCTTAGTGAA AGTAGACTTT AAAAATCCAC AGCCAGAGCA TTGGCAAGAT
GTTATCCCTG AAACCAAGAA TGTGCTCAGT ATTACTACCG CAGGCAAATA CTTATTTGCT
AAATATATGG TAGATGCTCT TTCTCAGGTA AAACAATACG ACTACGAAGG GAAGCTCATT
CGCGAAGTGA AGCTCCCCAG TATAGGTAGT GCGGGAGGTT TTTATGCTAA AAAAGATGAA
ACACACACCT ATTTTAGTTT CACCAATTAC GCATATCCTA CCCAAATATA CAAAATGGAT
TTGGCAACAG GAGCTACTGA ACTCTATTGG AAACCCGCTA TTGCTTTTGA TGCCACTCAC
TACGAATCTA AGCAAGTGTT TTATACCTCT AAAGACGGCA CAAAAATACC AATGATGATT
ACCTATAAAA AAGGAATCAA ACTCAACGGT AAAAATCCTA CCTTATTATA TGGATATGGA
GGGTTCAATA TCAGTTTGAT GCCTACATTC AGTGTTGCCA ATGCGGTGTG GTTGGAACTC
GGGGGGGTAT ATGCTGTTCC TAACTTACGT GGAGGAGGGG AATACGGTAA ACAATGGCAC
GATGCAGGCA CTAAGATGCA AAAGCAAAAC GTATTCGACG ATTTTATAGC AGCTGCTGAA
TATCTTATAA AAGAGAAATA CACCTCTCCC CAATACCTTG CTATCAGAGG AGGCTCTAAC
GGAGGACTCT TGGTAGGAGC TACAATGTTA CAACGCCCCG ACCTGTTTAA GGTAGCTTTA
CCCGCAGTAG GTGTACTCGA TATGTTGCGT TATCACACTT TTACTGCAGG AGCAGGCTGG
GCTTATGATT ATGGCACATC TGATGATAGC AAAGAAATGT TTGAATACTT AAAAGCCTAT
TCACCCTTAC ACAATGTAAA ACAAGGAGTA GCTTATCCCG CTACCCTTAT AACAACAGGA
GACCACGACG ATAGAGTAGT ACCTGCTCAC AGTTTTAAGT TTGCTGCGGA ATTGCAAGCA
AAACAAACGG GCAACAACCC TATTCTTATA CGAATAGAGA CTAATGCAGG GCACGGAGCA
GGAACACCAG TGAGCAAAAC TATAGAACAA AACGCCGATT TGCAAGCATT CACTCTTTGG
AATATGGGGA TTAAAACACT CCAATAA
|
|---|
| Protein sequence | MKHSLFSATL LLLVACNQNP NNTNDEKMNY PQTRMDNTVD TYFGTQVADP YRWLEDDRSA
ETAQWVKVQN DFTFGYLSKI PYRQAIKEKL EKLWNYEKLS APFTEGDYTY YYKNDGLQNQ
SVLYRKDKEG KEEIFLNPNT FSKDGTTSLG DVAFSEDGSL VAYLISEGGS DWRKGIVLDA
KTKKAIGDTL VDIKFSSIAW KGNEGFFYSS YDKPKGSELS AKTDQHKLYY HKLGTSQKSD
KLIFGGTPAE KYRYVSGTVS NDGKYLFISV ANATSGNKLF VKDLSNPKSS LVTITNNFDG
DTGFVNNQGT TLFLETNINA PNGRLVKVDF KNPQPEHWQD VIPETKNVLS ITTAGKYLFA
KYMVDALSQV KQYDYEGKLI REVKLPSIGS AGGFYAKKDE THTYFSFTNY AYPTQIYKMD
LATGATELYW KPAIAFDATH YESKQVFYTS KDGTKIPMMI TYKKGIKLNG KNPTLLYGYG
GFNISLMPTF SVANAVWLEL GGVYAVPNLR GGGEYGKQWH DAGTKMQKQN VFDDFIAAAE
YLIKEKYTSP QYLAIRGGSN GGLLVGATML QRPDLFKVAL PAVGVLDMLR YHTFTAGAGW
AYDYGTSDDS KEMFEYLKAY SPLHNVKQGV AYPATLITTG DHDDRVVPAH SFKFAAELQA
KQTGNNPILI RIETNAGHGA GTPVSKTIEQ NADLQAFTLW NMGIKTLQ
|
|---|
| |