Gene Coch_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0792 
Symbol 
ID8367210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp954217 
End bp954639 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content46% 
IMG OID644983219 
Productsugar-phosphate isomerase, RpiB/LacA/LacB family 
Protein accessionYP_003140910 
Protein GI256819631 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG CCATAGGAAA TGACCACGCA GGAGTCGATT ATAAAAAAGC TATTGTAGCT 
TTTCTGGAAA GTAAAGGAAT AGAAGTACTC AACTGCGGTA CCGATACTTC TGAAAGTGTA
GACTACCCCG ATTTTGGTCA CGCCGTAGCC AAAGCCTTAG AAGAAAACAA AGCCGACCTT
GGTATTGTGA TTTGCGGTAG TGGTAACGGC ATTGCAATGA GTGCCAATAA GCACCCTCAC
ATCCGCTGTG CAGTCTGCTG GACAAAAGAG CTCTCTGCTC TTGCCCGTGC CCATAACAAT
GCCAATGTGC TAAGCATTCC CGCCCGCTTT ACCGCCATTG AGCAAGCCGT AGATATAGCC
AATACCTTTC TCAACACCCC TTTTGAAGGC GGTCGCCACG AAAGAAGAGT AAAGAAGATT
TAA
 
Protein sequence
MKIAIGNDHA GVDYKKAIVA FLESKGIEVL NCGTDTSESV DYPDFGHAVA KALEENKADL 
GIVICGSGNG IAMSANKHPH IRCAVCWTKE LSALARAHNN ANVLSIPARF TAIEQAVDIA
NTFLNTPFEG GRHERRVKKI