Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0792 |
Symbol | |
ID | 8367210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 954217 |
End bp | 954639 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644983219 |
Product | sugar-phosphate isomerase, RpiB/LacA/LacB family |
Protein accession | YP_003140910 |
Protein GI | 256819631 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAG CCATAGGAAA TGACCACGCA GGAGTCGATT ATAAAAAAGC TATTGTAGCT TTTCTGGAAA GTAAAGGAAT AGAAGTACTC AACTGCGGTA CCGATACTTC TGAAAGTGTA GACTACCCCG ATTTTGGTCA CGCCGTAGCC AAAGCCTTAG AAGAAAACAA AGCCGACCTT GGTATTGTGA TTTGCGGTAG TGGTAACGGC ATTGCAATGA GTGCCAATAA GCACCCTCAC ATCCGCTGTG CAGTCTGCTG GACAAAAGAG CTCTCTGCTC TTGCCCGTGC CCATAACAAT GCCAATGTGC TAAGCATTCC CGCCCGCTTT ACCGCCATTG AGCAAGCCGT AGATATAGCC AATACCTTTC TCAACACCCC TTTTGAAGGC GGTCGCCACG AAAGAAGAGT AAAGAAGATT TAA
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Protein sequence | MKIAIGNDHA GVDYKKAIVA FLESKGIEVL NCGTDTSESV DYPDFGHAVA KALEENKADL GIVICGSGNG IAMSANKHPH IRCAVCWTKE LSALARAHNN ANVLSIPARF TAIEQAVDIA NTFLNTPFEG GRHERRVKKI
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