Gene Coch_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0786 
Symbol 
ID8367204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp948708 
End bp950078 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content43% 
IMG OID644983213 
Productanion transporter 
Protein accessionYP_003140904 
Protein GI256819625 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACCA ATTACATCAA ACGTTCCGTG ATTATAGCCA TCGCATTGGC GGTAGGCTTT 
TTGCTCTATG GGTTGCTTCC TTATGAAGAG CCTACTAATA AAGGCTTGGC ACTCCTTGCC
TTTGTAGCTA TCTTGTGGCT TACCGAAGCC ATACACATTA CCGTTACAGC ACTCTTAGTT
CCTGTATTGG CAATACTCTT GGGCTTAGAG AGTACCAAAA GTGCCCTACA AGCTTTTGCA
AACCCTACAA TCTTCCTATT CTTTGGAGGT TTCGCTATTG CTACTGCCCT GAGCGTACAA
AAGCTTGACA AGTACATCGC TCATAAGGTG ATTGCTATAG CCAGAGGCAA TTTCCTGTTA
GCGGTATTCT TCCTCTTTTT GGCTACTGCT TTGCTCTCTA TGGGTATCAG CAATACAGCT
ACTGCCGCAA TGATTATTCC TTTGGCAATT GGCTTGCTCA AAAACATCGA CTACGAAAGT
AATAAAGGTA CGTATGCTTT TGTGATACTC GGGGTTGCTT ATAGTGCGAG CATAGGAGGT
ATGGGTACCT TGGTGGGTAG CCCACCGAAT GCCATTGTCG CCTCTCAACT GAATATCACA
TTCTCAGAAT GGTTGCGCTA TGGTATGCCT ACAGTCTTAG GTTTAATGCC TTTGATGATT
GGTACGTTGT ACGTAGTGTT CCGTCCGAAA CTAAACATTA AAATCACCTC TACTGAAGGT
GTAGTAGATA AGCTCAACGG CAAGCAGTAT CTTACCATTC TCATCTTCCT TATCACAGCC
CTTTGCTGGA TATTTAGCGA CCTGATTAAC GAAACACTCA CATCTTTTAT AGGCATCGAG
AAAATCAAAG ACTTTGATGC AGTGGTAGCA ATGATTGCTG CCGTGTTCGT ATGTTTCTTT
GGTGTGGCCG AATGGAAACA AATACAAGAA AACACCGATT GGGGTGTGCT AATGCTCTTC
GGAGGTGGAC TCTCACTAAG CGTTATCCTT ACACAATCGG GGGCAAGTAA GGCATTGGTA
GACTCTGTGC AGTTCCTCAT CGCTGATAGC AACTATTTTG TAATAGGACT TATGGTAGCT
ACCTTCATCA TTTTCCTAAC TGAATTTACC AGTAATACCG CCAGCGCAGC TCTCTTAGTA
CCTATCTTCA TTTCGGTAGC CGAAAACTTA GGAGTTAATC CTTTGGGTCT TTCACTTATT
ATAGGTATAG GAGCCTCTTG TGCCTTTATG TTACCTGTGG CTACGCCTCC TAATGCCATA
GCTTACGGCA CGGGCAAGGT AAGTCAACGC GATATGATAA AAGCAGGTTT TGTATTGAAT
ATTCTTTGTA TTATCTTTAT ATCAGTAGTA GCCTACTACT TTTGGAGATA A
 
Protein sequence
MLTNYIKRSV IIAIALAVGF LLYGLLPYEE PTNKGLALLA FVAILWLTEA IHITVTALLV 
PVLAILLGLE STKSALQAFA NPTIFLFFGG FAIATALSVQ KLDKYIAHKV IAIARGNFLL
AVFFLFLATA LLSMGISNTA TAAMIIPLAI GLLKNIDYES NKGTYAFVIL GVAYSASIGG
MGTLVGSPPN AIVASQLNIT FSEWLRYGMP TVLGLMPLMI GTLYVVFRPK LNIKITSTEG
VVDKLNGKQY LTILIFLITA LCWIFSDLIN ETLTSFIGIE KIKDFDAVVA MIAAVFVCFF
GVAEWKQIQE NTDWGVLMLF GGGLSLSVIL TQSGASKALV DSVQFLIADS NYFVIGLMVA
TFIIFLTEFT SNTASAALLV PIFISVAENL GVNPLGLSLI IGIGASCAFM LPVATPPNAI
AYGTGKVSQR DMIKAGFVLN ILCIIFISVV AYYFWR