Gene Coch_0783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0783 
Symbol 
ID8367201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp941831 
End bp943786 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content47% 
IMG OID644983210 
Producthypothetical protein 
Protein accessionYP_003140901 
Protein GI256819622 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID[TIGR01905] doubled CXXCH domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAAA AACTATTGAT AGCCCTTGCT GTTCTATTAT GCCTTGTGGG TATTGTCTTT 
CTATTCTTCA AAACTACTAA TCAGGAGGCG TATACCTCCG TAGAGGATAT TAATAAAGAA
ACTCCTCAGG GCTACATAGG TTCGGCTTCC TGCAAGCAGT GTCACCTAAA AGAGTATAAT
GAATGGACGC TCTCCGACCA TTACAAGGCA ATGCAAATCG CTAACGATAG CACCGTACTC
GGCAATTTCA ATAACGTTAC CTACACCGCC GATGGCATCA CTTCTCGTTT CTTCAAGCGC
GATGGCAAAT TCTTTATCCA TACACAAAGC GAAGATGGCT CTTACAAAGA CTATGAGGTA
TTGTATACCT TTGGTTATTA CCCCCTACAA CAGTATATTA CCGATTTTCC TAACGGCAAA
AAGCAAGTCT TCCGTCAGTC GTGGGATAGC CGTCAAAACA AGTGGTTTCA CCAATACGCA
GGCGAGGTGA TTCCCCCCGA TGATTACCTG CATTGGACGC AAGCGGGACA GAATTGGAAC
CTAATGTGCG CCTCTTGCCA TAGCACAAAC CTGCAAAAAA ACCTCAACCC TTATACCAAC
TCCTATCACA CTACTTATAG CGAACTTACC GTAAGTTGTG AATCCTGCCA CGGAGGGGCT
AAAACGCACG CCGAGAGTAA GGGGAAAACT CGCACGTTTG TCCTTGCCTC GCAAACCCAA
GAACTCAATG CCTGTATGCC TTGCCATACG CGTAGGGGAG AGGTAACCCA GCACCACGCT
ATGGTAACAG AGGTAATGGA CGAATATCTG CCCGAAGTGC CCGTAACCGA CCTTTATTTT
CCCGACGGAC AAGTGTTAGG TGAAAACTAT AAATATTCGT CTTTCTTGCA AAGCAAAATG
TATCACCAAA ACGTGCGCTG TACCTCTTGC CATTCGCCTC ACACAGGTAA GCTGAAAGCC
GAAGGTAGCA AAGTGTGTTT GCAGTGTCAC GCACCTAAGT ACGCTTCTCA GGCACACACG
TTCCATAAGG GCAACCCAGC CGAAACCGAT TGCCGTGTGT GCCATATGCC TACCCGCACT
TATATGGGCA ACGATGTGCG TCACGACCAC AATTTCTACG TCCCTCGCCC CGATTTGTCT
GCTCAGTATG GCACACCCAA CGCTTGCAAT GCTTGTCATA CCGATAAAAC CGCAGGGTGG
GCAGCCGAAG CTGTTGCCAA GTGGTACGGC AAACAGCGCA AACCGCATTT CGCCGAAAAT
CTTATTAAAG GAAGTAAAGG AAATATCACC GCACTCAGTA GTCTGTTAGA AGACAAAACA
ACCCCCGCCA TTGTGCGTGC GGGAGCCATT CACTATCTGG GCAATCACCC TTCTGAAAAG
AGCTTTGCGC TTATTAAAAA AGAACTCCAC AATCCCGACC CACAAACGCG TTATCGTGCC
GTGGTGGCTA TTAGCGAATA TCCTCTAAAC CTCTATGAAA ATGATTTGTT GCCCTTACTT
ACCGATAAGG TGAAGGCGGT GCGTATGCTC GCCGCTAATG CCTTGCTCAC CCAAAAAGGA
TTAGAGGCTT GCAGGGTCTA TAATGGATTT GAACAAGCAC ACCAAGAGTA CAAGGAGTTT
GTGCTCTCAC AGTCCGATTT TCCATTAGGA AGTGCTACGG CAGGCGACTA TTTTGTGAAG
ATAAACGATA CCGATAACGC CATTCGTTTC TACGAGCGCG CTCTACTGAA AGACAAACAG
CTGAACTACA TTCGCCTAAA CCTCGCCGTT CTTTACAGTG GCAAAGCCCA AAACGACAAG
GCAGAAAGCT TCTTAAACGA AGCCTTGAAG TACGAACCCA AAAACGCCCA AATCTATTAC
GATTTGTATT TGCTCTACAA CGAACTTGGG CGCGAGGCAG AAGCCAAAGT TGCGCTTAGT
AAAGCCAAAG CCTTAGGATT TAAGGGTAGG TTTTAA
 
Protein sequence
MSKKLLIALA VLLCLVGIVF LFFKTTNQEA YTSVEDINKE TPQGYIGSAS CKQCHLKEYN 
EWTLSDHYKA MQIANDSTVL GNFNNVTYTA DGITSRFFKR DGKFFIHTQS EDGSYKDYEV
LYTFGYYPLQ QYITDFPNGK KQVFRQSWDS RQNKWFHQYA GEVIPPDDYL HWTQAGQNWN
LMCASCHSTN LQKNLNPYTN SYHTTYSELT VSCESCHGGA KTHAESKGKT RTFVLASQTQ
ELNACMPCHT RRGEVTQHHA MVTEVMDEYL PEVPVTDLYF PDGQVLGENY KYSSFLQSKM
YHQNVRCTSC HSPHTGKLKA EGSKVCLQCH APKYASQAHT FHKGNPAETD CRVCHMPTRT
YMGNDVRHDH NFYVPRPDLS AQYGTPNACN ACHTDKTAGW AAEAVAKWYG KQRKPHFAEN
LIKGSKGNIT ALSSLLEDKT TPAIVRAGAI HYLGNHPSEK SFALIKKELH NPDPQTRYRA
VVAISEYPLN LYENDLLPLL TDKVKAVRML AANALLTQKG LEACRVYNGF EQAHQEYKEF
VLSQSDFPLG SATAGDYFVK INDTDNAIRF YERALLKDKQ LNYIRLNLAV LYSGKAQNDK
AESFLNEALK YEPKNAQIYY DLYLLYNELG REAEAKVALS KAKALGFKGR F