Gene Coch_0783 details

Gene Information

• Locus tag: Coch_0783
• ID: 8367201
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: -
• Start bp: 941831
• End bp: 943786
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 644983210
• Product: hypothetical protein
• Protein accession: YP_003140901
• Protein GI: 256819622
• COG category: [R] General function prediction only
• COG ID: [COG4783] Putative Zn-dependent protease, contains TPR repeats
• TIGRFAM ID: [TIGR01905] doubled CXXCH domain

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAAAA AACTATTGAT AGCCCTTGCT GTTCTATTAT GCCTTGTGGG TATTGTCTTT 
CTATTCTTCA AAACTACTAA TCAGGAGGCG TATACCTCCG TAGAGGATAT TAATAAAGAA 
ACTCCTCAGG GCTACATAGG TTCGGCTTCC TGCAAGCAGT GTCACCTAAA AGAGTATAAT 
GAATGGACGC TCTCCGACCA TTACAAGGCA ATGCAAATCG CTAACGATAG CACCGTACTC 
GGCAATTTCA ATAACGTTAC CTACACCGCC GATGGCATCA CTTCTCGTTT CTTCAAGCGC 
GATGGCAAAT TCTTTATCCA TACACAAAGC GAAGATGGCT CTTACAAAGA CTATGAGGTA 
TTGTATACCT TTGGTTATTA CCCCCTACAA CAGTATATTA CCGATTTTCC TAACGGCAAA 
AAGCAAGTCT TCCGTCAGTC GTGGGATAGC CGTCAAAACA AGTGGTTTCA CCAATACGCA 
GGCGAGGTGA TTCCCCCCGA TGATTACCTG CATTGGACGC AAGCGGGACA GAATTGGAAC 
CTAATGTGCG CCTCTTGCCA TAGCACAAAC CTGCAAAAAA ACCTCAACCC TTATACCAAC 
TCCTATCACA CTACTTATAG CGAACTTACC GTAAGTTGTG AATCCTGCCA CGGAGGGGCT 
AAAACGCACG CCGAGAGTAA GGGGAAAACT CGCACGTTTG TCCTTGCCTC GCAAACCCAA 
GAACTCAATG CCTGTATGCC TTGCCATACG CGTAGGGGAG AGGTAACCCA GCACCACGCT 
ATGGTAACAG AGGTAATGGA CGAATATCTG CCCGAAGTGC CCGTAACCGA CCTTTATTTT 
CCCGACGGAC AAGTGTTAGG TGAAAACTAT AAATATTCGT CTTTCTTGCA AAGCAAAATG 
TATCACCAAA ACGTGCGCTG TACCTCTTGC CATTCGCCTC ACACAGGTAA GCTGAAAGCC 
GAAGGTAGCA AAGTGTGTTT GCAGTGTCAC GCACCTAAGT ACGCTTCTCA GGCACACACG 
TTCCATAAGG GCAACCCAGC CGAAACCGAT TGCCGTGTGT GCCATATGCC TACCCGCACT 
TATATGGGCA ACGATGTGCG TCACGACCAC AATTTCTACG TCCCTCGCCC CGATTTGTCT 
GCTCAGTATG GCACACCCAA CGCTTGCAAT GCTTGTCATA CCGATAAAAC CGCAGGGTGG 
GCAGCCGAAG CTGTTGCCAA GTGGTACGGC AAACAGCGCA AACCGCATTT CGCCGAAAAT 
CTTATTAAAG GAAGTAAAGG AAATATCACC GCACTCAGTA GTCTGTTAGA AGACAAAACA 
ACCCCCGCCA TTGTGCGTGC GGGAGCCATT CACTATCTGG GCAATCACCC TTCTGAAAAG 
AGCTTTGCGC TTATTAAAAA AGAACTCCAC AATCCCGACC CACAAACGCG TTATCGTGCC 
GTGGTGGCTA TTAGCGAATA TCCTCTAAAC CTCTATGAAA ATGATTTGTT GCCCTTACTT 
ACCGATAAGG TGAAGGCGGT GCGTATGCTC GCCGCTAATG CCTTGCTCAC CCAAAAAGGA 
TTAGAGGCTT GCAGGGTCTA TAATGGATTT GAACAAGCAC ACCAAGAGTA CAAGGAGTTT 
GTGCTCTCAC AGTCCGATTT TCCATTAGGA AGTGCTACGG CAGGCGACTA TTTTGTGAAG 
ATAAACGATA CCGATAACGC CATTCGTTTC TACGAGCGCG CTCTACTGAA AGACAAACAG 
CTGAACTACA TTCGCCTAAA CCTCGCCGTT CTTTACAGTG GCAAAGCCCA AAACGACAAG 
GCAGAAAGCT TCTTAAACGA AGCCTTGAAG TACGAACCCA AAAACGCCCA AATCTATTAC 
GATTTGTATT TGCTCTACAA CGAACTTGGG CGCGAGGCAG AAGCCAAAGT TGCGCTTAGT 
AAAGCCAAAG CCTTAGGATT TAAGGGTAGG TTTTAA 

 

Protein sequence

MSKKLLIALA VLLCLVGIVF LFFKTTNQEA YTSVEDINKE TPQGYIGSAS CKQCHLKEYN 
EWTLSDHYKA MQIANDSTVL GNFNNVTYTA DGITSRFFKR DGKFFIHTQS EDGSYKDYEV 
LYTFGYYPLQ QYITDFPNGK KQVFRQSWDS RQNKWFHQYA GEVIPPDDYL HWTQAGQNWN 
LMCASCHSTN LQKNLNPYTN SYHTTYSELT VSCESCHGGA KTHAESKGKT RTFVLASQTQ 
ELNACMPCHT RRGEVTQHHA MVTEVMDEYL PEVPVTDLYF PDGQVLGENY KYSSFLQSKM 
YHQNVRCTSC HSPHTGKLKA EGSKVCLQCH APKYASQAHT FHKGNPAETD CRVCHMPTRT 
YMGNDVRHDH NFYVPRPDLS AQYGTPNACN ACHTDKTAGW AAEAVAKWYG KQRKPHFAEN 
LIKGSKGNIT ALSSLLEDKT TPAIVRAGAI HYLGNHPSEK SFALIKKELH NPDPQTRYRA 
VVAISEYPLN LYENDLLPLL TDKVKAVRML AANALLTQKG LEACRVYNGF EQAHQEYKEF 
VLSQSDFPLG SATAGDYFVK INDTDNAIRF YERALLKDKQ LNYIRLNLAV LYSGKAQNDK 
AESFLNEALK YEPKNAQIYY DLYLLYNELG REAEAKVALS KAKALGFKGR F