Gene Coch_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0780 
Symbol 
ID8367198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp939775 
End bp940101 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content35% 
IMG OID644983207 
ProductVirulence protein-like protein 
Protein accessionYP_003140898 
Protein GI256819619 
COG category[R] General function prediction only 
COG ID[COG3943] Virulence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACC AAAAAGGAGA AATCTTATTC TATCAGCGAG AAGATGGTTC AGCCCAAATA 
GATGTAAGAC TCGAAGAGGA TACCGTATGG CTTACACAAC AATTAATGGC TGAGCTTTTT
AACACTTCCA AACAAAATAT AAGTTTACAC ATTCAGAATA TATTTGAAGA AGGGGAACTT
ATACCCGATT CAACTGTCAA GAAATTCTTG ACAGTTCAAA AGGAAGGTCC CCGAGATGTT
AGAAGACCCT CAAAGGCAAT GGAGGAGGTA ATTTTAGAGA GTTTAAAAGT ATTAGAAAAG
AACACAGCTA AATTATTAAA GAAATAA
 
Protein sequence
MENQKGEILF YQREDGSAQI DVRLEEDTVW LTQQLMAELF NTSKQNISLH IQNIFEEGEL 
IPDSTVKKFL TVQKEGPRDV RRPSKAMEEV ILESLKVLEK NTAKLLKK