| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0775 |
|---|
| Symbol | |
|---|
| ID | 8367193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 934310 |
|---|
| End bp | 935653 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644983202 |
|---|
| Product | secreted protein containing tetratricopeptide repeats |
|---|
| Protein accession | YP_003140893 |
|---|
| Protein GI | 256819614 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGAA GAATTTTATT AGCCACAGTA GTTGCAAGTT TCTTTTATGT TGCCTATGCA
CAAGCACAAG ATTGCAAAAA CAACGAAGAA TTAAAGCAAA AACTCTCTAT ATTTAGTGAG
TATGCCAAAG CCAAAAATTA CAAAGAGGCT TATCCTGTAT GGAAGGAAGT ATATACCCAA
TGCCCTTCTT TACACTATGC TACCTTTGCC TATGGCGAAC GCATCTTGCA AGACAAAATG
AATACAACCA CAGGTGCTGA AAAGACTCAA AATGCTAAAG AATTGTTACA ACTCTACACC
GATTATAACA AAACATTCCC TACGCGTCTT TCAGCTACTG AAATGCGTAT TCGTCAAGCC
CTCTTGATGT TCGATGAAAA AATAGGAACA GATAAAGAGA TTTACGATCT TTTGCATAAA
GCCTTTACCG AAGATAAAGC TAACTTTAAA AACGAAAAGG CTCTGTATTT GTACTTCTCT
GAATTAGTTT CTTTACACGA AAAAGGACAA AAAGAATTGC AAGAAGTATT CGATGCTTAT
GATAACGTAT CCGATAAGAT TCAAGACGAA AAGAATGAGC TTTCTGAAAC TATCAACAAG
TATTTAGCTC AAGAAGAAGC AGGTACTCTT AGCGAAAAGG ACAAAAGGCT CTTGGACGGT
TGTCGTAAAC GCGTAGATAA CTACGAAACT ATTGCAGAGA GCGTAGATGC TAAACTCGGT
CAGCTTGCTG ATTGTAAAAA CCTTATTCCT CTTTACACCA AGAACTTTGA GGCAAATAAG
AACAATGAAG AATGGTTACG CCGTGCAGCA GGTAAAATGT CCGATAAAGA TTGTACCAAA
GACCCTCTAT TCGTGAAAAT CGTAACCTCA TTGCACAACG TAAAACCGTC AGCAAACTCA
GCTTACTATT TAGGGGTAAT GAATGACAAA GCAGGAAATT CTGCCAAAGC TATTCAGTAT
TACAATGAGT CAGTGAACTT AGAGACAGAT AACTTTAAGA AATCAAAATT GCTCATTCGT
ATTGCCTCTA AACACAGTAA AGCACAAGCG GTTGCCTATG CTCAAAAAGC ACTTTCTTAC
AACCCTTCAA ACTCCGATGC TTATCGTATT ATGGCGCACG CCTACGCAAG CTCAGCTAAT
GAATGTGGTA GTACTCCTTT TGAAAAAAGA GCCGTATATT GGTTAGCTGC CAAAACTGCT
CGTAAAGGAG GTTTGGAAAG TTTAGCTGCT CGTTACGATG CTTTAGCTCC TTCAAAAGTA
GATGTATTTG AATCTGGTTT AGCAGGTAAA AACATTACTT TTAAATGCTG GATAGGACAA
TCTATCACAG TGCCACGTTT GTAA
|
|---|
| Protein sequence | MRRRILLATV VASFFYVAYA QAQDCKNNEE LKQKLSIFSE YAKAKNYKEA YPVWKEVYTQ
CPSLHYATFA YGERILQDKM NTTTGAEKTQ NAKELLQLYT DYNKTFPTRL SATEMRIRQA
LLMFDEKIGT DKEIYDLLHK AFTEDKANFK NEKALYLYFS ELVSLHEKGQ KELQEVFDAY
DNVSDKIQDE KNELSETINK YLAQEEAGTL SEKDKRLLDG CRKRVDNYET IAESVDAKLG
QLADCKNLIP LYTKNFEANK NNEEWLRRAA GKMSDKDCTK DPLFVKIVTS LHNVKPSANS
AYYLGVMNDK AGNSAKAIQY YNESVNLETD NFKKSKLLIR IASKHSKAQA VAYAQKALSY
NPSNSDAYRI MAHAYASSAN ECGSTPFEKR AVYWLAAKTA RKGGLESLAA RYDALAPSKV
DVFESGLAGK NITFKCWIGQ SITVPRL
|
|---|
| |