| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0755 |
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| Symbol | |
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| ID | 8367173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 912017 |
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| End bp | 913351 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983182 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diamin opimelate/D-alanyl-D-alanylligase |
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| Protein accession | YP_003140873 |
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| Protein GI | 256819594 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0553781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAAG AGCTTTATCA AAGATATATA AATTCAGCGG GCGTAAGTAC TGATACCCGC
AATATAACAC CTAATAGTAT TTACTTTGCC TTAAAAGGAG CTTCGTTTAA CGGCAACACC
TTTGCTCAAG AAGCTCTTGC CAAAGGAGCC TGCTATGCAG TTATTGATGA CCCTGCTTAT
CACATCGCCG ATAAAACACT TTTGGTAGAC GATGTCCTCA CTACACTCCA ACAGCTCGCT
ACCTATCACC GCAGGAAGCT AAAAACACTC GTTATTGGTA TTACCGGTAG CAATGGAAAA
ACCACCACAA AGGAGCTTAT CAAGTCGGTA TTATCACAAC AACTGAACAT AGTAGCTACA
CAAGGCAACC TAAACAACAA TATAGGAGTA CCTCTCACTT TGCTCACAAT TAAACCAGAA
ACGGATATTG CTATTGTGGA GATGGGTGCC AATCACCCCG GTGAAATTGC CTTCTTATGT
TCTATTGCTG AACCCGACTA CGGCTATATT ACCAGTATTG GTAAAGCGCA TTTAGAAGGC
TTTGGTTCTT TTGAAGGCGT CATAAAAACC AAAGGCGAGC TCTATGATTA CCTCAAAACA
CACCATAAAA CCATTATTGC CAATGCCGAT AATCCTATCA CCGAAGCACT TTTGGAAAAC
TATAACAATG TGTACAGTTT TGGAGTAGGC GAAGGGGTAA ACGTCTCTGC GCAATGTCTC
AGCACTCAAC CCGTGAAAAT ACAGTTTGCT GACTCGTCCC TACAAACCAC CACAGAAGGA
TTCCCTGCCA ATATAGAGGG CTTTACTGAT ACTCCCACTG TCGCAACTTC TCATCTGGTA
GGAAGCTATA ACTTCACTAA TATTGCTGCT TCGGTGGCTT TTGGGCGTTA CTTCAAACTC
TCTACAAAGG CTATTCAGAA AGGCATAGAG AGCTATATTC CTCAAAACAA TCGCAGTCAG
CTATTGCAAT GGGGTAGTAA TACAGTTTTG CTCGACGCCT ATAATGCCAA TCCTAGCAGT
ATGACTGCTG CTATCGACAA TCTTCTTTCT ATGAACAGCT TCCCTAATAA AGTGCTTATT
CTCGGCGATA TGTTTGAGCT TGGCGATTAC GCTACTCAGG AGCATCAAAG CATTGTCGAT
AAACTCAAAG AGCACCAATG GGCAGGGGTA TACCTCATCG GAAAGAATTT TAAACAAACT
AAAGCGCCTT ATCCGCAGTA TGAAACCTTT GAGGAATTCC GAGAAGTCTT TAAGAAGCTT
TCTTTTCAAG ACAGCCTAAT ACTCATCAAA GGTTCAAGAG GAATGGCGTT GGAAAGACTT
ATAGCCAACT CTTAA
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| Protein sequence | MIEELYQRYI NSAGVSTDTR NITPNSIYFA LKGASFNGNT FAQEALAKGA CYAVIDDPAY
HIADKTLLVD DVLTTLQQLA TYHRRKLKTL VIGITGSNGK TTTKELIKSV LSQQLNIVAT
QGNLNNNIGV PLTLLTIKPE TDIAIVEMGA NHPGEIAFLC SIAEPDYGYI TSIGKAHLEG
FGSFEGVIKT KGELYDYLKT HHKTIIANAD NPITEALLEN YNNVYSFGVG EGVNVSAQCL
STQPVKIQFA DSSLQTTTEG FPANIEGFTD TPTVATSHLV GSYNFTNIAA SVAFGRYFKL
STKAIQKGIE SYIPQNNRSQ LLQWGSNTVL LDAYNANPSS MTAAIDNLLS MNSFPNKVLI
LGDMFELGDY ATQEHQSIVD KLKEHQWAGV YLIGKNFKQT KAPYPQYETF EEFREVFKKL
SFQDSLILIK GSRGMALERL IANS
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