Gene Coch_0731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0731 
Symbol 
ID8367148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp887103 
End bp887540 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content44% 
IMG OID644983157 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_003140849 
Protein GI256819570 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATCCA ATTCCAGCAA GTATGCCATC AATGCAGTAA TATACCTTGC CATACACTCG 
TCGGCAAGCC ATAGAATAGC GCCCAAAGAC GTGGCAGAAG CGCTACATAT TCCTACGCCC 
TTTTTGGCAA AAATATTGCA AACTTTAGCC CGCAAAAAGG TAATTAGCTC CAACAAAGGA 
CCTGGAGGAG GCTTTTGGCT CTCCGATGAG GAAAAACAAG CTCCTTTAAT GACCGTTGTA 
GAGCAAATAG GTGAAGCCGA TAAGTTTATC GCTTGTGCGA TGGGCTTCAA AGAGTGTTCA 
TCAGAGAAAC CCTGTCCGTT ACACGCTTCC GTACAGCCTT TCAGAGATAA TTTTATGCGA 
GAACTTAGCG AGAACTCCAT AGCCTCCTTT GCTCAAAAAA TTGCTGATAA AACTGCTTTC 
TTATCACCTA CGGAGTAA
 
Protein sequence
MLSNSSKYAI NAVIYLAIHS SASHRIAPKD VAEALHIPTP FLAKILQTLA RKKVISSNKG 
PGGGFWLSDE EKQAPLMTVV EQIGEADKFI ACAMGFKECS SEKPCPLHAS VQPFRDNFMR 
ELSENSIASF AQKIADKTAF LSPTE